DY257212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 5.784e-69 Identity = 124/247 (50.20%), Postives = 171/247 (69.23%), Query Frame = 3 Query: 12 KLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E + L+D L + +TG D +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR +E L +EL+F+++YLG TF FS+ Sbjct: 74 KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 5.784e-69 Identity = 124/247 (50.20%), Postives = 171/247 (69.23%), Query Frame = 3 Query: 12 KLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E + L+D L + +TG D +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR +E L +EL+F+++YLG TF FS+ Sbjct: 74 KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 5.784e-69 Identity = 124/247 (50.20%), Postives = 171/247 (69.23%), Query Frame = 3 Query: 12 KLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E + L+D L + +TG D +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR +E L +EL+F+++YLG TF FS+ Sbjct: 74 KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 2.198e-68 Identity = 123/247 (49.80%), Postives = 171/247 (69.23%), Query Frame = 3 Query: 12 KLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP +KPN+V G VQ+CW KFARY++VEL+E+ + G MDP + +E DENTI V G T G +E + L+D L + +TG D +H+DAASGGF+APF+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR +E L +EL+F+++YLG TF FS+ Sbjct: 74 KLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSR 319
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 2.687e-66 Identity = 126/251 (50.20%), Postives = 168/251 (66.93%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFS 749 E KLM + KN +D EYP TTE++NRCVN+IA L+NA + E +G T+GSSEA ML G+A K W+ + + G + KPN+V + QVCWEKF Y+++E++EV + + ++ K ++ VDE TI V I+G T G ++D+K L++L+ E NK+T + IHVDAASGG APF+ PELEWDFRL V SIN SGHKYGLVY G+GWV+WR K+ L EELIF ++YLG PT FS Sbjct: 71 EAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFS 319
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 2.687e-66 Identity = 126/251 (50.20%), Postives = 169/251 (67.33%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFS 749 E KLM + KN +D EYP TTE++NRCVN+IA L+NA + E +G T+GSSEA ML G+A K W+ + + G + KPN+V + QVCWEKF Y+++E++EV + + + ++ K ++ VDE TI V I+G T G ++D+K L++L+ E NK+T + IHVDAASGG APF+ PELEWDFRL V SIN SGHKYGLVY G+GWV+WR K+ L EELIF ++YLG PT FS Sbjct: 71 EAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFS 319
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.893e-63 Identity = 119/252 (47.22%), Postives = 161/252 (63.89%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 E + LM + KN +D EYP T EL+NRCVNI+A L+NAP E S +G TVGSSEA ML GLA K +W+N + G +PN++ + QVCWEKF Y++V+++ V + + + +D K E+VDE TI + ILG T G+F+D+ LL++ + N+ IH+D ASG PF+ PEL WDFRL V SIN SGHKYGLVY G+GW++W+ KE L +ELIF ++YLG PT FS+ Sbjct: 72 EAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKEMSY--LGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKEHLSLDVEKVFELVDEYTIGIVGILGITYTGKFDDIALLDEKVEAYNEANEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSR 321 HSP 2 Score: 22.7126 bits (47), Expect = 5.893e-63 Identity = 10/26 (38.46%), Postives = 14/26 (53.85%), Query Frame = 2 Query: 731 LPLNFF*GPSQVIPPYYHLFPLGF*G 808 + +NF SQ+I YY+ GF G Sbjct: 315 MAINFSRSASQIIGQYYNFLRYGFEG 340
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.002e-62 Identity = 118/252 (46.83%), Postives = 162/252 (64.29%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 E + LM + KN +D EYP T EL+NRCVNI+A L+NAP + S +G TVGSSEA ML GLA K +W+N + G +PN++ + QVCWEKF Y++V+++ V + + + +D K ++VDE TI V ILG T G+F+D++LL++ + N+ IH+D ASG PF+ PEL WDFRL V SIN SGHKYGLVY G+GW++W+ KE L +ELIF ++YLG PT FS+ Sbjct: 72 EAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKDMSY--LGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGKFDDIQLLDEKVEAYNETNEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSR 321 HSP 2 Score: 22.7126 bits (47), Expect = 1.002e-62 Identity = 10/26 (38.46%), Postives = 14/26 (53.85%), Query Frame = 2 Query: 731 LPLNFF*GPSQVIPPYYHLFPLGF*G 808 + +NF SQ+I YY+ GF G Sbjct: 315 MAINFSRSASQIIGQYYNFLRYGFEG 340
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 3.074e-62 Identity = 119/252 (47.22%), Postives = 163/252 (64.68%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPF--DKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 E KLM + KN +D EYP T EL+NRCVNIIA L++AP + + +G T+GSSEA ML G+A K W+ + + G KPN+V + QVCWEKF Y++++++ V + + + ++ + ++ VDE TI V ILG T G ++D+ LN+ L E N +T + IHVDAASGGF PF+ P++ WDFRL V SIN SGHKYGLVY GIGWV+W+ + L EELIF ++YLG PT FS+ Sbjct: 69 EATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAPKD--QKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSR 318
BLAST of DY257212 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 3.074e-62 Identity = 117/252 (46.43%), Postives = 165/252 (65.48%), Query Frame = 3 Query: 3 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRKKEELAEELIFHINYLGAYQPTFPSIFSK 752 E +++M + KN +D EYP T +L++ CVN++A L+N +++SE +G TVGSSEA ML G+A K +W++ G KP++V + QVCWEKF Y+++EL+EV +SE + ++ ++ VDE TI + ILG T G+F+D+ LNDL+ + N + IHVD ASG PF+ P LEWDFRLP V SIN SGHKYGLVY G+GW++WR KE L EEL+F ++YLG + PT FS+ Sbjct: 67 EAEQIMAETMEKNAIDKSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQVCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIMTLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGLVYPGVGWILWRDKEYLPEELVFDVSYLGGHMPTMAINFSR 316 The following BLAST results are available for this feature:
BLAST of DY257212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257212 ID=DY257212; Name=DY257212; organism=Citrus sinensis; type=EST; length=1280bpback to top |