DY257206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNJA (GTP-binding protein lepA OS=Synechococcus sp. (strain JA-3-3Ab) GN=lepA PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 5.794e-85 Identity = 171/259 (66.02%), Postives = 199/259 (76.83%), Query Frame = 1 Query: 184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKALYLKVLRI*REVIEIFQALM--EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 VP S IRNFSIIAHIDHGKSTLAD+LL+ TGTV REMK Q LDNM+LERERGITIKLQAARM Y + + + LNLIDTPGHVDF+YEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPV+NKIDLPGAEP RV EIE+VIGLDC+ AIL SAK GIGI EIL AIV+R+PPP +T PL+AL + ++ +M E+ + FMASG+ Y + E+GV+ P+ + + EVG+ Sbjct: 4 VPVSRIRNFSIIAHIDHGKSTLADRLLEATGTVSAREMKPQLLDNMELERERGITIKLQAARMNYRAQDGQDYVLNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVINKIDLPGAEPERVIAEIEQVIGLDCSGAILASAKMGIGIPEILEAIVQRVPPPRDTVADPLRALIFDSYYDSYRGVIVYVRIMDGEVKTGDKICFMASGREYEITELGVMRPHQESVASLHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNS3 (GTP-binding protein lepA OS=Synechococcus sp. (strain CC9311) GN=lepA PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 7.568e-85 Identity = 166/258 (64.34%), Postives = 202/258 (78.29%), Query Frame = 1 Query: 187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 P IRNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNM+LERERGITIKLQAARM+Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVY+ALEN+LEIIPVLNKIDLPGA+P R+ EIE +IGLDC+NAI CSAK G+G+ EIL ++V R+PPP++T P KAL + R VI F+ + + ++ + MAS K Y LDE+G++ P+ K++++ EVG+ Sbjct: 5 PVKRIRNFCIIAHIDHGKSTLADRLLQDTGTVANRDMQEQFLDNMELERERGITIKLQAARMKYKAADGEEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYMALENDLEIIPVLNKIDLPGADPDRIKEEIEAIIGLDCSNAIPCSAKTGLGVPEILQSVVDRVPPPADTVKEPTKALIFDSYYDPYRGVIVYFRVMSGSISRKDKVLLMASNKTYELDEVGIMAPDEKKVDELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROM9 (GTP-binding protein lepA OS=Prochlorococcus marinus (strain MIT 9312) GN=lepA PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.686e-84 Identity = 169/256 (66.02%), Postives = 204/256 (79.69%), Query Frame = 1 Query: 193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 S IRNF IIAHIDHGKSTLAD+LLQ TGTVQ+R+M+EQFLD+MDLERERGITIKLQAARM+Y +++ + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNK+DLPGA+ ++ +EIEE+IGLD +NAI CSAK G+GI +IL AIV+R+P P + +P KAL + R VI F+ + L KR + MAS K Y LDEIG++ P+ +Q+++ EVG+ Sbjct: 7 SKIRNFCIIAHIDHGKSTLADRLLQDTGTVQQRDMQEQFLDSMDLERERGITIKLQAARMKYKADDSQEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKVDLPGADAEKIKQEIEEIIGLDTSNAINCSAKTGVGIKDILEAIVRRVPAPQDEIKLPTKALIFDSYYDPYRGVIVYFRVISGSLNKREKILLMASKKNYELDEIGIMAPDQQQVDELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNS9 (GTP-binding protein lepA OS=Synechococcus sp. (strain CC9902) GN=lepA PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 3.756e-84 Identity = 168/258 (65.12%), Postives = 199/258 (77.13%), Query Frame = 1 Query: 187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVF-ENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 P S IRNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNM+LERERGITIKLQAARM Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKIDLPGA+P R+ E+E +IGLDC+NAI CSAK G+G+ EIL A+V R+P P++ P KAL + R VI F+ + + + + MAS K Y LDEIG++ PN +++E+ EVG+ Sbjct: 5 PVSRIRNFCIIAHIDHGKSTLADRLLQDTGTVANRDMQEQFLDNMELERERGITIKLQAARMNYTAADGEQYVLNLIDTPGHVDFSYEVSRSLLACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGADPDRIKEEVEAIIGLDCSNAIYCSAKTGLGVPEILQAVVDRVPAPADAVEEPTKALIFDSYYDPYRGVIVYFRVMSGRISCKDKVLLMASKKTYELDEIGIMAPNERKVEELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNPX (GTP-binding protein lepA OS=Synechococcus sp. (strain WH8102) GN=lepA PE=3 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 1.427e-83 Identity = 167/258 (64.73%), Postives = 198/258 (76.74%), Query Frame = 1 Query: 187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVF-ENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 P S IRNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y + + + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLAL+N+LEIIPVLNKIDLPGA+P R+ E+E +IGLDC NAI CSAK G+G+ EIL A+V R+PPP + P KAL + R VI F+ + + + + MAS K Y LDEIG++ P+ K++++ EVG+ Sbjct: 5 PVSRIRNFCIIAHIDHGKSTLADRLLQDTGTVANRDMQEQFLDNMDLERERGITIKLQAARMNYTATDGQQYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALDNDLEIIPVLNKIDLPGADPDRIKEEVEAIIGLDCDNAIPCSAKTGLGVPEILQAVVDRVPPPKDALEEPTKALIFDSYYDPYRGVIVYFRVMSGRISCKDKVLLMASKKTYELDEIGIMAPDQKKVDELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNSC (GTP-binding protein lepA OS=Synechococcus sp. (strain CC9605) GN=lepA PE=3 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 1.864e-83 Identity = 167/258 (64.73%), Postives = 198/258 (76.74%), Query Frame = 1 Query: 187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 P S IRNF IIAHIDHGKSTLAD+LLQ TGTV R+M++QFLDNMDLERERGITIKLQAARM Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLAL+N+LEIIPVLNKIDLPGA+P R+ E+E +IGLDC NAI CSAK G+G+ EIL A+V R+PPP + P KAL + R VI F+ + + + + MAS K Y LDEIG++ P+ K++++ EVG+ Sbjct: 5 PVSRIRNFCIIAHIDHGKSTLADRLLQDTGTVANRDMQDQFLDNMDLERERGITIKLQAARMNYTAAHGEEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALDNDLEIIPVLNKIDLPGADPDRIKEEVEAIIGLDCDNAIPCSAKTGLGVPEILQAVVDRVPPPKDAVEEPTKALIFDSYYDPYRGVIVYFRVMSGRINCKDKVLLMASKKTYELDEIGIMAPDQKKVDELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROM5 (GTP-binding protein lepA OS=Prochlorococcus marinus (strain MIT 9515) GN=lepA PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 3.180e-83 Identity = 169/259 (65.25%), Postives = 203/259 (78.38%), Query Frame = 1 Query: 184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 + S IRNF IIAHIDHGKSTLAD+LLQ TGTV++R+M++QFLD+MDLERERGITIKLQAARM+Y E+ + + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNK+DLPGA+ +++ +EIEEVIGLD +NAI CSAK G GI +IL A+V RIP P N P +AL + R VI F+ + + KR + MAS K Y LDEIG++ P+ KQ+++ EVG+ Sbjct: 4 ISVSKIRNFCIIAHIDHGKSTLADRLLQDTGTVKQRDMQDQFLDSMDLERERGITIKLQAARMKYKAEDSQEYILNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKVDLPGADANKIKQEIEEVIGLDTSNAINCSAKTGEGIEDILEAVVSRIPHPQNEIKSPTRALIFDSYYDPYRGVIVYFRVISGSINKRDKILLMASKKHYELDEIGIMAPDEKQVDELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROMM (GTP-binding protein lepA OS=Prochlorococcus marinus (strain MIT 9313) GN=lepA PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 4.153e-83 Identity = 168/259 (64.86%), Postives = 198/259 (76.45%), Query Frame = 1 Query: 184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVF-ENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 VP S +RNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKIDLPG++P R+ EIE +IGLD + AI CSAK G+G+ EI+ A+V RIPPP++T P KAL + R VI F+ + + + + MAS K Y LDEIGV+ P+ ++ + EVG+ Sbjct: 4 VPVSRLRNFCIIAHIDHGKSTLADRLLQDTGTVAGRDMQEQFLDNMDLERERGITIKLQAARMNYTAADGESYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGSDPERIKEEIEAIIGLDTSTAIACSAKTGLGVPEIMQAVVDRIPPPADTIDKPTKALIFDSYYDSYRGVIVYFRVISGRISTKDKVLLMASKKSYELDEIGVMSPDQCEVNELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROMA (GTP-binding protein lepA OS=Prochlorococcus marinus GN=lepA PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 4.153e-83 Identity = 167/259 (64.48%), Postives = 198/259 (76.45%), Query Frame = 1 Query: 184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 +P + +RNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNK+DLPGA+ R+ +EIE +IGLD + AI CSAK GIGI EIL ++V RIPPP + P KAL + R VI F+ + + +R + MAS K Y LDEIG++ P+ +++E EVG+ Sbjct: 4 IPVARLRNFCIIAHIDHGKSTLADRLLQETGTVSSRDMQEQFLDNMDLERERGITIKLQAARMNYCASDGEQYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKVDLPGADSERIKQEIESIIGLDTSTAIECSAKTGIGIPEILQSVVDRIPPPKDLLNDPTKALIFDSYYDSYRGVIVYFRVMTGSISRRDKILLMASRKSYELDEIGIMSPDQRKVEDLHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNPW (GTP-binding protein lepA OS=Synechococcus sp. (strain WH7803) GN=lepA PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 5.423e-83 Identity = 167/258 (64.73%), Postives = 197/258 (76.36%), Query Frame = 1 Query: 187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVF-ENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 P S IRNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKIDLPGA+P R+ E+E +IGLDC+ AI CSAK G+G+ EIL A+V R+P P + P KAL + R VI F+ + + + + MAS K Y LDEIG++ P+ K++++ EVG+ Sbjct: 5 PVSRIRNFCIIAHIDHGKSTLADRLLQDTGTVANRDMQEQFLDNMDLERERGITIKLQAARMNYTAADGEEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGADPDRIKEEVEAIIGLDCSKAIPCSAKTGLGVPEILQAVVDRVPAPKDAVEEPTKALIFDSYYDPYRGVIVYFRVMSGRINCKDKVLLMASKKTYELDEIGIMAPDQKKVDELHAGEVGY 262 The following BLAST results are available for this feature:
BLAST of DY257206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257206 ID=DY257206; Name=DY257206; organism=Citrus sinensis; type=EST; length=1286bpback to top |