DY257206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROM3 (GTP-binding protein lepA OS=Prochlorococcus marinus (strain MIT 9303) GN=lepA PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 5.423e-83 Identity = 167/259 (64.48%), Postives = 199/259 (76.83%), Query Frame = 1 Query: 184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVF-ENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 VP S +RNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNKIDLPG++P R+ EIE +IGLD + AI CSAK G+G++EI+ A+V RIPPP++T P +AL + R VI F+ + + + + MAS K Y LDEIGV+ P+ ++ + EVG+ Sbjct: 4 VPVSRLRNFCIIAHIDHGKSTLADRLLQDTGTVAGRDMQEQFLDNMDLERERGITIKLQAARMNYTAADGESYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGSDPERIKEEIEAIIGLDTSTAIACSAKTGLGVSEIMQAVVDRIPPPADTLDEPTRALIFDSYYDSYRGVIVYFRVISGRISTKDKVLLMASKKSYELDEIGVMSPDQCEVNELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_SYNR3 (GTP-binding protein lepA OS=Synechococcus sp. (strain RCC307) GN=lepA PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 7.083e-83 Identity = 171/258 (66.28%), Postives = 200/258 (77.52%), Query Frame = 1 Query: 187 PASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 P S +RNF IIAHIDHGKSTLAD+LLQ TGTV R+M+ QFLDNMDLERERGITIKLQAARM++ + E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLAL N+LEIIPVLNKIDLPGA+ R++ EIEE+IGLD +NAI CSAK G+G+ EIL AIV R+P P +T PLKAL + R VI F+ + L K+ + MAS K Y LDEIGV+ P+ KQ+++ EVG+ Sbjct: 5 PVSRLRNFCIIAHIDHGKSTLADRLLQDTGTVADRDMQAQFLDNMDLERERGITIKLQAARMQFKAADGELYTLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALGNDLEIIPVLNKIDLPGADAERISTEIEEIIGLDTSNAIHCSAKTGLGVPEILQAIVDRVPAPPDTTEEPLKALIFDSYYDPYRGVIVYFRVVSGRLRKKDKVLLMASKKTYELDEIGVMSPDQKQVDELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROMP (GTP-binding protein lepA OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=lepA PE=3 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 1.023e-81 Identity = 166/259 (64.09%), Postives = 200/259 (77.22%), Query Frame = 1 Query: 184 VPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 + S IRNF IIAHIDHGKSTLAD+LLQ TGTV++R+M++QFLD+MDLERERGITIKLQAARM+Y +++ + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNK+DLPGA+ ++ +EIEE+IGLD +NAI CSAK G GI +IL A+V RIP P N KAL + R VI F+ + + K+ + MAS K Y LDEIG++ P+ KQ+ + EVG+ Sbjct: 4 ISVSKIRNFCIIAHIDHGKSTLADRLLQDTGTVKQRDMQDQFLDSMDLERERGITIKLQAARMKYKAKDSQEYILNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKVDLPGADAEKIKQEIEEIIGLDTSNAINCSAKTGEGIEDILEAVVSRIPHPQNEVKSLTKALIFDSYYDPYRGVIVYFRVIAGSINKKDKILLMASKKNYELDEIGIMAPDEKQVNELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROMT (GTP-binding protein lepA OS=Prochlorococcus marinus (strain NATL2A) GN=lepA PE=3 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 3.887e-81 Identity = 166/262 (63.36%), Postives = 196/262 (74.81%), Query Frame = 1 Query: 175 LLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 + VP S +RNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y ++ E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNK+DLPGA+P ++ EIE +IGLD + AI CSAK G+GI EIL A+V RIP P + KAL + R VI F+ + + K+ + M+S K Y LDEIGV+ P+ ++ EVG+ Sbjct: 1 MTNVPISRLRNFCIIAHIDHGKSTLADRLLQDTGTVSSRDMQEQFLDNMDLERERGITIKLQAARMNYKADDGEEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKVDLPGADPEKIKNEIESIIGLDTSKAISCSAKTGVGIPEILQAVVDRIPSPKDNTDQATKALIFDSYYDPYRGVIVYFRIMSGGISKKDKVLLMSSKKSYELDEIGVMAPDQVKVNSLHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROM1 (GTP-binding protein lepA OS=Prochlorococcus marinus (strain NATL1A) GN=lepA PE=3 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 3.887e-81 Identity = 166/262 (63.36%), Postives = 196/262 (74.81%), Query Frame = 1 Query: 175 LLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 + VP S +RNF IIAHIDHGKSTLAD+LLQ TGTV R+M+EQFLDNMDLERERGITIKLQAARM Y ++ E + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNK+DLPGA+P ++ EIE +IGLD + AI CSAK G+GI EIL A+V RIP P + KAL + R VI F+ + + K+ + M+S K Y LDEIGV+ P+ ++ EVG+ Sbjct: 1 MTNVPISRLRNFCIIAHIDHGKSTLADRLLQDTGTVSSRDMQEQFLDNMDLERERGITIKLQAARMNYKADDGEEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKVDLPGADPEKIKNEIESIIGLDTSKAISCSAKTGVGIPEILQAVVDRIPSPKDNTDQATKALIFDSYYDPYRGVIVYFRIMSGGISKKDKVLLMSSKKSYELDEIGVMAPDQVKVNSLHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PROM4 (GTP-binding protein lepA OS=Prochlorococcus marinus (strain MIT 9211) GN=lepA PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 4.297e-80 Identity = 159/262 (60.69%), Postives = 198/262 (75.57%), Query Frame = 1 Query: 175 LLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVF-ENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVGH 951 + VP S +RNF IIAHIDHGKSTLAD+LLQ T TV R+M++QFLDNM+LERERGITIKLQAARM+Y + + LNLIDTPGHVDFSYEVSRSL ACEGALLVVDASQGVEAQTLANVYLALEN+LEIIPVLNK+DLPG++P ++ +EIE +IGLD + AI CSAK G+G+ +IL A+V+R+PPP +T +AL + R VI F+ + R + MAS K Y LDEIG++ P+ +++ + EVG+ Sbjct: 1 MTNVPVSRLRNFCIIAHIDHGKSTLADRLLQDTATVASRDMQDQFLDNMELERERGITIKLQAARMKYTATDGNEYVLNLIDTPGHVDFSYEVSRSLQACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKVDLPGSDPEKIKKEIESIIGLDTSQAISCSAKTGLGVTDILQAVVERVPPPKDTLEQATQALIFDSYYDPYRGVIVYFRVTAGSISARDQILLMASKKSYELDEIGIMAPDQQKVNELHAGEVGY 262
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_MOOTA (GTP-binding protein lepA OS=Moorella thermoacetica (strain ATCC 39073) GN=lepA PE=3 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 4.751e-79 Identity = 159/260 (61.15%), Postives = 192/260 (73.85%), Query Frame = 1 Query: 178 LKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL-YLKVLRI*REVIEIFQALM-EL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVG 948 + V IRNF IIAHIDHGKSTLAD+LL+ TG + KREM +Q LD MDLERERGITIKLQA R+ Y + + + LNLIDTPGHVDF+YEVSRSLAACEGALLVVDA+QG+EAQTLANVYLALE+NLEIIPV+NKIDLP AEP RV REIE+VIGLD + AIL SAK G+G EIL AI++R+PPP PL+AL + + R I F+ + + K R FMA+G + ++E+GV P P+ +E EVG Sbjct: 1 MSVEQKYIRNFCIIAHIDHGKSTLADRLLEYTGALSKREMVDQVLDTMDLERERGITIKLQAVRLHYKARDGQEYVLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYLALEHNLEIIPVINKIDLPSAEPERVRREIEDVIGLDASEAILASAKTGVGTEEILEAIIRRVPPPRGDGEAPLQALIFDSIFDSYRGAIPYFRVVQGRVRKGDRIRFMATGAEFEVNEVGVFTPAPRPVESLAAGEVG 260
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_HELMI (GTP-binding protein lepA OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=lepA PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 3.405e-77 Identity = 153/257 (59.53%), Postives = 195/257 (75.88%), Query Frame = 1 Query: 193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL----YLKVLRI*REVIEIFQALMEL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVG 948 +NIRNF IIAHIDHGKSTLAD++L+ TG + +REM++Q LD+MDLERERGITIKLQA R++Y + + + LNLIDTPGHVDF+YEVSRSLAACEGALLVVDA+QG+EAQTLANVYLALEN+LEIIPV+NKIDLP AEP RV +EIE+VIGLD ++AIL SAK GIGI E L AIV +IPPP PL+ + + + + + + ++ K + M++GK + + E+GV P P+Q+EK + EVG Sbjct: 6 ANIRNFCIIAHIDHGKSTLADRILEFTGALTEREMEDQVLDSMDLERERGITIKLQAVRLQYKAKDGQVYTLNLIDTPGHVDFTYEVSRSLAACEGALLVVDAAQGIEAQTLANVYLALENDLEIIPVVNKIDLPSAEPDRVKQEIEDVIGLDASDAILVSAKAGIGIEETLEAIVAKIPPPEGDPTAPLQCMIFDSFYDAYKGAISYVRVVEGTVK--KGTKIKMMSTGKTFEVTEVGVFTPAPRQVEKLSSGEVG 260
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_MAGSM (GTP-binding protein lepA OS=Magnetococcus sp. (strain MC-1) GN=lepA PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 1.690e-76 Identity = 156/260 (60.00%), Postives = 192/260 (73.85%), Query Frame = 1 Query: 196 NIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRY-VFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL--------YLKVLRI*REVIEIFQALMEL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVG 948 +IRNFSIIAHIDHGKSTLAD+L+Q TG + +R+MKEQ LD+MD+ERERGITIK Q+ R+ Y + + + LNLIDTPGHVDF+YEVSRSLAACEGALL+VDA+QGVEAQT+ANVYLALE++LEIIPVLNKIDLP AEP RV +IEEVIGLD + AIL SAK GIGI EIL AIVKR+PPP P KAL YL V+ + R ++ +++ ++ R FM G Y LD +G + P ++ + EVG Sbjct: 5 HIRNFSIIAHIDHGKSTLADRLIQFTGALSERDMKEQVLDSMDIERERGITIKAQSVRLNYKAKDGKTYVLNLIDTPGHVDFTYEVSRSLAACEGALLIVDAAQGVEAQTMANVYLALEHDLEIIPVLNKIDLPSAEPERVREQIEEVIGLDASEAILASAKSGIGIEEILEAIVKRVPPPKGDLDAPAKALVVDSWYDNYLGVVSLAR----VYDGVLKAGEKIR--FMGVGMDYPLDNVGFLTPVLTKVAELKAGEVG 258
BLAST of DY257206 vs. ExPASy Swiss-Prot
Match: LEPA_PELCD (GTP-binding protein lepA OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=lepA PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 8.387e-76 Identity = 153/261 (58.62%), Postives = 190/261 (72.80%), Query Frame = 1 Query: 193 SNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFEN-EPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGMPLKAL--------YLKVLRI*REVIEIFQALMEL*KR*RNPFMASGKGYYLDEIGVVPPNPKQMEKATRREVG 948 S IRNFSIIAHIDHGKSTLAD+LL+ TG + RE QFLD +DLERERGITIK QA R++Y E+ + + LNLIDTPGHVDFSYEVSRSLAACEG +LVVDASQGVEAQTLANVYLA++ NLE+ PVLNK+DLPGAEP+R+ EIEE+IGLD ++A+ SAKEGIGI+EIL +IV+++P P A PLKAL Y V+ + + IF ++ K + MAS + Y + +IG P+P + + EVG Sbjct: 4 SKIRNFSIIAHIDHGKSTLADRLLETTGALSDREKTNQFLDKLDLERERGITIKAQAVRLKYRAEDGQDYILNLIDTPGHVDFSYEVSRSLAACEGGMLVVDASQGVEAQTLANVYLAIDQNLEVFPVLNKVDLPGAEPARIKEEIEEIIGLDASDAVEASAKEGIGIHEILESIVEKVPAPKGDADAPLKALIFDSWYDSYQGVIML----VRIFDGTLK--KGDKIQLMASKRSYEVLKIGAFSPHPVEFSEMAAGEVG 258 The following BLAST results are available for this feature:
BLAST of DY257206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257206 ID=DY257206; Name=DY257206; organism=Citrus sinensis; type=EST; length=1286bpback to top |