FC871254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: RPN11_ENCCU (26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi GN=RPN11 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.800e-45 Identity = 102/202 (50.50%), Postives = 122/202 (60.40%), Query Frame = 3 Query: 45 VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 VVGWYHSHPGFGCWLS VDI+TQQSFE L +RAVAVVVDPIQSVKGKVVIDAFRLI+ Q +LG EPRQ TSN+G+L P++ + IHGLN+HYYS I R W D L L D SK +E L L Y KA +EE L + +A VGR D ++ L E + N + +L + IF Sbjct: 98 VVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPIQSVKGKVVIDAFRLIDNQLGVLGGEPRQVTSNIGYLKTPTLISIIHGLNKHYYSFNITCRKNDFEQKMLLNLHRKTWADNLKLG--DVRSKR-----EEALKLIESYGKAFEEEKNLAGKNPDMAKVGRIDYRRRLLEKCEESIMENTIYSLLYSIHRYIF 292
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: YPT5_CAEEL (Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.732e-43 Identity = 92/209 (44.02%), Postives = 124/209 (59.33%), Query Frame = 3 Query: 45 VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMML-----GQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELP------PEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLD 638 VVGWYHSHPGFGCWLS VD+NTQQSFEAL+ RAVAVVVDPIQSVKGKV++DAFR +NP + + EPRQTTSNLGHL KPS+ + +HGL YYS+ + YR W D L + + K E+ + + L +NK + E E P + + G+ +AK+ L+ S+L++ ++ L M++ Sbjct: 106 VVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKPSLISVVHGLGTKYYSLNVAYRMGSNEQKMLMCLNKKSWYDQLNMSTYSELEKKQEEKFKSINKLIAVFNKDIDEVKEKPIADKKGKTQEEVKKFGKINAKQQLQMITSSLLNDSLCHQLTAMIN 314
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_USTMA (COP9 signalosome complex subunit 5 OS=Ustilago maydis GN=RRI1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 45 VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSV-KGKVVIDAFR 206 VVGWYHSHPG+GCWLSG+D+NTQ++ + VA+V+DP +++ GKV I AFR Sbjct: 141 VVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFR 195
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.255e-13 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 48 VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINY 344 VGWYHSHPG+GCWLSG+D++TQ + + VA+VVDP+++V GKV + AFR +EP + + LNK I+ F +H + YY + I+Y Sbjct: 131 VGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTI--PLNK--IEDFGVH--CKQYYPLEISY 225
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_NEUCR (COP9 signalosome complex subunit 5 OS=Neurospora crassa GN=rri-1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 45 VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSV-KGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRH-YYSIAINY 344 V+GWYHSHPG+GCWLSG+D+ TQ + N+ VAVV+DP ++V + KV I AFR I P+ + TT + + ++ F G + H YY++ + + Sbjct: 122 VIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTI-PEGIKPFAATNTTTGDGQSVPLNKVEDF--GAHSHRYYALDVEH 220
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans GN=rri1 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 57/200 (28.50%), Postives = 89/200 (44.50%), Query Frame = 3 Query: 48 VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQ-------DAKKHLEEHVSNLMSSNIVQTL 623 VGWYHSHPG+GCWLSG+D++T Q + ++ VAVV+DP +++ GKV I AFR +E + LNK H HYYS+ ++ W L+ T + ++ML+L+ K + + + PP A V Q D ++ + E V L+++ + L Sbjct: 130 VGWYHSHPGYGCWLSGIDVST-QDMQQMSGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKEEQEEDEYQTVPLNKAE-DFGAHA--SHYYSLEVSLFKSALDTEILSLLWNKYWVATLSQSPL---FTTRDYGSKQMLDLSQKTRRVARGIESNPPRGGAPTQVRDQQLERVVKDGQRIVSEEVKGLLAAEVKMQL 322
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5A_ARATH (COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 45 VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINY 344 VVGWYHSHPG+GCWLSG+D++TQ+ + + +AVV+DP ++V GKV I AFR + + P + S + I+ F +H + YYS+ + Y Sbjct: 137 VVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFRTYSKGY----KPPDEPVSEYQTIPLNKIEDFGVH--CKQYYSLDVTY 232
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 59/213 (27.70%), Postives = 98/213 (46.01%), Query Frame = 3 Query: 48 VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLG-QEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKA------------VQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDT 641 +GWYHSHPG+GCWLSG+D++TQ + + VAVV+DP +++ GKV + AFR T G + P + S + I+ F +H + YY++ + Y W + L+ ++ E T ++ +L+ K ++ ++ D +KLA A +D+ K E + LMS I L ++T Sbjct: 132 IGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-----TYPKGYKPPDEGPSEYQTIPLNKIEDFGVH--CKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNA---EYTTGQVFDLSEKLEQSEAQLGRGSFMLGLESHDRKSEDKLAKAT---RDSCKTTIEAIHGLMSQVIKDKLFNQINT 331
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNE (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans GN=RRI1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 3 Query: 51 GWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFR 206 GWYHSHPG+GCWLSG+D+NTQ + + N +AVV+DP ++V GKV I AFR Sbjct: 131 GWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFR 183
BLAST of FC871254 vs. ExPASy Swiss-Prot
Match: CSN5_YARLI (COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica GN=RRI1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 45 VVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGL-NRHYYSIAINY 344 +VGWYHSHPG+GCWLSG+D++TQ + + +AVVVDP +++ GKV I AFR + P++ T + P +A +G + YY + +++ Sbjct: 134 IVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFRTYPKDY----KPPKKATKQNQDQSVPLSKAKDYGAHSERYYELDVSF 231 The following BLAST results are available for this feature:
BLAST of FC871254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871254 ID=FC871254; Name=FC871254; organism=Citrus sinensis; type=EST; length=819bpback to top |