FC871251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_CAEEL (60S ribosomal protein L4 OS=Caenorhabditis elegans GN=rpl-4 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 5.970e-32 Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 45 STVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S + +P V + RPD+V ++ +N RQ +A + KAG Q SAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGG MFAP K++RRWHR +N+ QKRY Sbjct: 19 SQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQHSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKRY 121
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_ENTHI (60S ribosomal protein L4 (Fragments) OS=Entamoeba histolytica GN=RPL4 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16 Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 156 KAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 KAG Q SA SWGTGRAV RIPR+ G G+ R GQGAFGNM R G MF+P K +R+W RK +R+ Sbjct: 3 KAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 68
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_METS3 (50S ribosomal protein L4P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl4p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.810e-11 Identity = 33/109 (30.28%), Postives = 55/109 (50.46%), Query Frame = 3 Query: 27 MAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 M + + +P + RPD++ + QP+ + +AG +TSA+ WG+GR R+PR+ G + AF M GGR PT+ + H KIN+ ++R+ Sbjct: 8 MEGEVKEEIELPAIFNEEYRPDLIKRAVISAQTARVQPWGNDPEAGKRTSAKGWGSGRGTARVPRIKNG-----SKAAFVPMAVGGRRAHPTRAEKNHHEKINIKERRF 111 The following BLAST results are available for this feature:
BLAST of FC871251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871251 ID=FC871251; Name=FC871251; organism=Citrus sinensis; type=EST; length=405bpback to top |