FC871249

Overview
NameFC871249
Unique NameFC871249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            +EKAIFIF++++LPPT A+MS IYEE KDEDGFLYV YSGENTFG
Sbjct:   72 SEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGSHIPV 154
            +EKAIFIFV+++LPPT A++S IYEE KDEDGFLYV YSGENTFG  + +
Sbjct:   72 SEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFGEKLAI 121          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_MAGGR (Autophagy-related protein 8 OS=Magnaporthe grisea GN=ATG8 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    2 SAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            S EKAIFIFV + LPPT A+MS+IYE  KDEDGFLY+TYSGENTFG
Sbjct:   71 SPEKAIFIFVQDTLPPTAALMSSIYELHKDEDGFLYITYSGENTFG 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.762e-14
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGS 142
            AEKAIFIFV++ LPPT A+M A+Y+E KD+DGFLYV YSGENTFGS
Sbjct:   71 AEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFGS 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.831e-14
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            +EKAIFIFV+++LPPT A++S IYEE KD+DGFLYV YSGENTFG
Sbjct:   72 SEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTFG 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.831e-14
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 2
Query:    8 EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            EKAIFIFVD++LPPT A+MS+IY+E KDEDGFLYV Y+ ENTFG
Sbjct:   74 EKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTFG 117          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13
Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            +EKAIFIFV+++LPPT ++MS IYE+ KDEDGFLY+ YSGENTFG
Sbjct:   72 SEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 2
Query:    8 EKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            EKAIFIFV++ LPPT ++MS +Y+E KD+DGFLYVTYSGENTFG
Sbjct:   73 EKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.383e-13
Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            AEKAIFIFV++ LPPT A+MS+IY++ KD+DGFLYV+YS ENTFG
Sbjct:   72 AEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of FC871249 vs. ExPASy Swiss-Prot
Match: GBRL2_RAT (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Rattus norvegicus GN=Gabarapl2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 2
Query:    5 AEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 139
            +EKAIF+FVD  +P +   M  +YE++KDEDGFLYV YSGENTFG
Sbjct:   72 SEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of FC871249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ATG8_DEBHA1.779e-1477.78Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_CANAL1.779e-1470.00Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_MAGGR3.964e-1478.26Autophagy-related protein 8 OS=Magnaporthe grisea ... [more]
ATG8_ASHGO6.762e-1476.09Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_LODEL8.831e-1475.56Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_CRYNE8.831e-1477.27Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8_PICAN1.153e-1373.33Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_CANGA1.967e-1375.00Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_KLULA4.383e-1373.33Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
GBRL2_RAT6.997e-1164.44Gamma-aminobutyric acid receptor-associated protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DF06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871249 ID=FC871249; Name=FC871249; organism=Citrus sinensis; type=EST; length=635bp
GAGTGCTGAAAAGGCGATATTTATTTTTGTGGATAATGTGCTCCCACCTA
CAGGTGCAATTATGTCTGCCATATACGAAGAGAAAAAGGATGAAGATGGT
TTTCTTTATGTGACTTACAGTGGGGAGAACACATTTGGAAGCCACATCCC
AGTTTAGCCTTGTGATTATCTATCTGCTCATTGTGTGGTTTCTTGTGCGA
CCACATTTTTATCTCAATTATCATCCTTGCTTTCCGCTGAATATTCCTTT
ATCGGGCATATTTTATATTTTATAAAGACATTGCCAGTGATAATATGTAC
AGTTACCTATTGTATATAAGTCTTAAAGGCATAATATGTCAAATTTCTTT
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAACCCCCCCTTTTTTTTTTAAAAATTGGTTTTTAAAAAAAAATTTTT
TTTTTTTTTTTTTTGGCCCAAAGGGGGCCCTCCCCCAAAAAAAAAAAATT
TTTTTTCCCCCCCCCCAAAAACCCCCCAAGGGGGGGTTATATAAGGGGGC
AATTTTTTTTTCCGGCCCTCCCGGGCCCGGTCCCA
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