DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_JANSC (50S ribosomal protein L1 OS=Jannaschia sp. (strain CCS1) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.299e-19 Identity = 58/142 (40.85%), Postives = 86/142 (60.56%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLV 923 KRF + EGK+ ++ A++LLK S TKF ET E +L +DP++ DQ +R TV+LP GTGK+V+VAV A+G K +EA A AD+VG +DL+E ++ ++ C+ T + + K L PR+ PK+G V Sbjct: 6 KRFAAAKAAVEGKENITVEEAVALLKGNSKTKFDETIEIAMKLGVDPRHADQMVRGTVNLPNGTGKTVRVAVFARGPKAEEATAAGADIVGAEDLMETVQGGT--IEFDRCIATPDMMPIVGRLGKVLGPRNLMPNPKIGTV 145
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HYPNA (50S ribosomal protein L1 OS=Hyphomonas neptunium (strain ATCC 15444) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.299e-19 Identity = 58/163 (35.58%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 492 TRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 T+ KR I+ + K Y + A+ L+K + KF E+ E L +DPKY DQQ+R+ V+LP GTGK+++VAV A+ +K +EA A AD+VG DDL E++ + + G K L PR PK+G V P + K K V+++ Sbjct: 3 TKGKRARAIEQTVDKTKAYSVSEAVKLVKSNAKAKFDESIEIAINLGVDPKYADQQVRSVVNLPAGTGKTIRVAVFAKDKKAEEALAAGADIVGADDLFEKVNGGFMDFDRVIATPDMMG-LVGRLGKVLGPRGLMPNPKVGTVTPNVAQAVKDAKGGAVEFK 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ENT38 (50S ribosomal protein L1 OS=Enterobacter sp. (strain 638) GN=rplA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.299e-19 Identity = 59/171 (34.50%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I++ + K+YD+ AI+LLK++++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV AQG + AK A A+LVG +DL +QIK+ + + + + + L PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMSVIRDKVDATKQYDITEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPNGTGRSVRVAVFAQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACA2 (50S ribosomal protein L1 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.111e-19 Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 + K+++E L + K YD+ A++L K+ ++ KF T E FRL +DP+ NDQQ+R V LP GTGK+ +V V A+GEK EA+ A AD VG D I +I++ Sbjct: 4 KGKKYVEAAKLVDRAKAYDVAEAVALTKKTNTAKFDATVEVAFRLGVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDSDYIAKIQQ 106 HSP 2 Score: 22.7126 bits (47), Expect = 5.111e-19 Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K GT T + +A Sbjct: 128 GRVLGPKGLMPNPKTGTVTFEVEKA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_YERE8 (50S ribosomal protein L1 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 58/171 (33.92%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I++ + K+YD+ A++LLK++++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV AQG + AK A A+LVG +DL +QIK+ + + + + + L PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRVIRDKVDVTKQYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFAQGANAEAAKEAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVG-----QLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_VIBFM (50S ribosomal protein L1 OS=Vibrio fischeri (strain MJ11) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 61/177 (34.46%), Postives = 90/177 (50.85%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR----------RIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I+ E KEYD+ A++LLK++++ KFTE+ + L ID + +DQ +R LP GTG+ ++VAV QG + AK A ADLVG +DL E +K+ ++ L TI G PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRNIREKVEVTKEYDINEAVALLKELATAKFTESVDVAVNLGIDARKSDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMNFDVVVASPDAMRVVGQLGTILG-----------PRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_VIBF1 (50S ribosomal protein L1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rplA PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 61/177 (34.46%), Postives = 90/177 (50.85%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR----------RIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I+ E KEYD+ A++LLK++++ KFTE+ + L ID + +DQ +R LP GTG+ ++VAV QG + AK A ADLVG +DL E +K+ ++ L TI G PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRNIREKVEVTKEYDINEAVALLKELATAKFTESVDVAVNLGIDARKSDQNVRGATVLPHGTGREIRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMNFDVVVASPDAMRVVGQLGTILG-----------PRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HELMI (50S ribosomal protein L1 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 K++LE L + + + + A+ ++K++++ KF ET E FRL +DP++ DQ +R V LP GTGKS KVAV A+G+K EA+ A AD VG +DL+E+I+ A + G + L P+ PK G V R ++ K K++YR + G+ Sbjct: 6 KKYLEQAKLVDRDQVLEAREAMDMVKKLATAKFDETVEVAFRLGVDPRHADQMIRGAVVLPHGTGKSRKVAVFAKGDKAKEAEAAGADAVGAEDLVEKIQGGWLDFDVAVATPDVMG-LVGKLGRLLGPKGLMPNPKTGTVTFDVARAIQEIKAGKIEYRVDKTGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ERWT9 (50S ribosomal protein L1 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 58/171 (33.92%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I++ + K+YD+ A++LLK++++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV AQG + AK A A+LVG +DL +QIK+ + + + + + L PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRVIRDKVDSTKQYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFAQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ENTS8 (50S ribosomal protein L1 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I++ + K+YD+ AI+LLK++++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV QG + AK A A+LVG +DL EQIK+ + + + + + L PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRVIRDKVDATKQYDINEAITLLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGPNAEAAKAAGAELVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |