DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLTR (50S ribosomal protein L1 OS=Chlamydia trachomatis GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR IQ + K Y L AI +LKQ + +F +T + +L IDP+ +DQQ+R +VSLP GTGK +++ V A G+K EA A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGIQETYDLAKSYSLGEAIDILKQCPTVRFDQTVDVSVKLGIDPRKSDQQIRGSVSLPHGTGKVLRILVFAAGDKAAEAIEAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTTDVVKTVAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLTA (50S ribosomal protein L1 OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR IQ + K Y L AI +LKQ + +F +T + +L IDP+ +DQQ+R +VSLP GTGK +++ V A G+K EA A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGIQETYDLAKSYSLGEAIDILKQCPTVRFDQTVDVSVKLGIDPRKSDQQIRGSVSLPHGTGKVLRILVFAAGDKAAEAIEAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTTDVVKTVAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLT2 (50S ribosomal protein L1 OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR IQ + K Y L AI +LKQ + +F +T + +L IDP+ +DQQ+R +VSLP GTGK +++ V A G+K EA A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGIQETYDLAKSYSLGEAIDILKQCPTVRFDQTVDVSVKLGIDPRKSDQQIRGSVSLPHGTGKVLRILVFAAGDKAAEAIEAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTTDVVKTIAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BIFLO (50S ribosomal protein L1 OS=Bifidobacterium longum GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 62/167 (37.13%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HG 995 RSK++ E + Y AI+LLK M S F +T EA FRL++DP+ DQ +R TV+LP GTGK+ KV V A+G K EA A AD+VG DDLI +++ + G + + L PR PK G V + K K K+++R + +G Sbjct: 4 RSKKYREAAERVDRNNLYTANEAIALLKSMPSYNFDQTVEAVFRLSVDPRKADQLVRGTVNLPHGTGKTAKVLVFARGPKATEATEAGADIVGDDDLIAKVQGGFLDFDAVVATPDMMG-KVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKNG 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BIFLD (50S ribosomal protein L1 OS=Bifidobacterium longum (strain DJO10A) GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 62/167 (37.13%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HG 995 RSK++ E + Y AI+LLK M S F +T EA FRL++DP+ DQ +R TV+LP GTGK+ KV V A+G K EA A AD+VG DDLI +++ + G + + L PR PK G V + K K K+++R + +G Sbjct: 4 RSKKYREAAERVDRNNLYTANEAIALLKSMPSYNFDQTVEAVFRLSVDPRKADQLVRGTVNLPHGTGKTAKVLVFARGPKATEATEAGADIVGDDDLIAKVQGGFLDFDAVVATPDMMG-KVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKNG 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_AQUAE (50S ribosomal protein L1 OS=Aquifex aeolicus GN=rplA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.615e-19 Identity = 62/169 (36.69%), Postives = 89/169 (52.66%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSST---KFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK----EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K+++E L + K Y L+ A+ LLK+M +F ET E RLN+DP+Y DQ +R +V LP G GK +KV V A+GE +A+ A AD VGGD+LI +I + + + I PK + L PR PK G V + K KR +V+++ Sbjct: 4 RGKKYIEASKLVDRNKRYTLEEAVDLLKKMEEVLQRRFDETVELAMRLNVDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYVGGDELINKILKE----EWTDFDVAIATPEMMPKVAKLGRILGPRGLMPSPKTGTVTTNVEQAIKDAKRGRVEFK 168
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_LACSS (50S ribosomal protein L1 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.650e-19 Identity = 45/102 (44.12%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 + K +LE + K Y ++ AI L+K++ KF + E +RLN+DPK DQQ+R V LP GTGK+ +V V AQGE+ +A+ A AD+VG +DL+E+I+ Sbjct: 4 KGKNYLEAAKQVDATKAYTVEEAIDLVKKVDFAKFDASLEVAYRLNVDPKQADQQIRGAVVLPNGTGKTQRVIVFAQGEQAKQAEAAGADVVGAEDLVEKIQ 105 HSP 2 Score: 23.483 bits (49), Expect = 6.650e-19 Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K GT T ++ +A Sbjct: 128 GRVLGPKGLMPNPKTGTVTMDVTKA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_THEP1 (50S ribosomal protein L1 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.333e-19 Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-----IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 SKR+LE + + K YDL AI L+K+ ++ KF ET E H + ID + +Q +R TV LP GTGK V+V V A+GE EA A AD VG +DL+E+I++ + + + I K L PR PK G V K+FK+ +++ R Sbjct: 5 SKRYLEARKFVDRTKYYDLDEAIELVKKTATAKFDETIELHIQTGIDYRKPEQHIRGTVVLPHGTGKEVRVLVFAKGEAAKEALEAGADYVGAEDLVEKIEKEGFLDFDVAIATPDMMRVIG-----RLGKILGPRGLMPSPKSGTVTQEVAEAVKEFKKGRIEVR 165
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PARUW (50S ribosomal protein L1 OS=Protochlamydia amoebophila (strain UWE25) GN=rplA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.333e-19 Identity = 56/167 (33.53%), Postives = 86/167 (51.50%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR EI + K Y ++ AI +LK+ KF +T E +L +DP+ +DQ +R TVSLP GTGK++K+ V A+G+K EA A AD G D+L+E++ + K L PR PK G V + ++ K K++++ + HG+ Sbjct: 5 SKRIREIAKSLDAAKAYTIREAIDILKKCPPVKFDQTVEVSLKLGVDPRRSDQSVRGTVSLPNGTGKTMKILVFAKGDKVKEALEAGADYAGHDELLEKVNGGWTDFDAVVATPDMMR-EVGKLGKVLGPRGLMPTPKAGTVTTDIAKAIQELKAGKIEFKLDRHGV 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLTB (50S ribosomal protein L1 OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=rplA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.333e-19 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR IQ + K Y L AI +LKQ + +F +T + +L IDP+ +DQQ+R +VSLP GTGK +++ V A G+K EA A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGIQETYDLAKSYSLGEAIDILKQCPTVRFDQTVDVSVKLGIDPRKSDQQVRGSVSLPHGTGKVLRILVFAAGDKAAEAIEAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTTDVVKTIAELRKGKIEFKADRAGVC 171 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |