DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLMU (50S ribosomal protein L1 OS=Chlamydia muridarum GN=rplA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.577e-19 Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR IQ + K Y L AI +LKQ + +F +T + +L IDP+ +DQQ+R +VSLP GTGK +++ V A G+K EA A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGIQEKYDFTKPYSLGEAIDILKQCPAVRFDQTVDVSVKLGIDPRKSDQQIRGSVSLPHGTGKVLRILVFAAGDKAAEAIEAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKSGTVTTDVVKAIAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACLD (50S ribosomal protein L1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.577e-19 Identity = 60/162 (37.04%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 + K+++E L + K YD+ AI L+K+ ++ KF T EA FRL +DP+ NDQQ+R V LP GTGK+ +V V A+GEK EA+ A AD VG D I +I++ + G + L P+ PK G V + + K KV+YR Sbjct: 4 KGKKYVEAAKLVDRTKAYDVNEAIELVKKTNTAKFDATVEAAFRLGVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDADYINKIQQGWFDFDVIVATPDMMG-EVGKIGRVLGPKGLMPNPKTGTVTFEVEKAVNEIKAGKVEYR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ALCBS (50S ribosomal protein L1 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.577e-19 Identity = 64/177 (36.16%), Postives = 92/177 (51.98%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK----------RRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR I+ E K Y ++ A++LL ++S+ KF E+ + L +DP+ +DQ +R LP GTGK+V+VAV AQG K +EAK A AD+VG DDL EQ++ ++ L TI G PR PK+G V P + K K +V+YR + G+ Sbjct: 5 SKRNRAIREKIEAGKLYPVEEAVALLAELSAVKFKESVDVAVNLGVDPRKSDQNVRGASVLPHGTGKTVRVAVFAQGAKAEEAKEAGADVVGFDDLAEQVQGGEINFDVVIASPDAMRVVGKLGTILG-----------PRGLMPNPKVGTVTPDVAQAVKNAKGGQVRYRTDKGGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_DESMR (50S ribosomal protein L1 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=rplA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.589e-19 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 519 QNLREGKKE------YDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 +N RE K+ Y++ A++L Q KF ET + L ++PKY+DQ +R VSLP G GK+++VA +G+K EA+ A AD VGGDDLIE++K Sbjct: 6 KNYREAIKDIDLTAKYEVSEAMALTVQTGKAKFDETVDVALNLGVNPKYSDQMVRGAVSLPHGLGKTIRVAAFCKGDKETEAREAGADFVGGDDLIEKVK 105 HSP 2 Score: 23.8682 bits (50), Expect = 9.589e-19 Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 GKI GL+PN+K GT + ++ +A Sbjct: 128 GKILGPRGLMPNAKTGTVSFDIGKA 152 HSP 3 Score: 22.3274 bits (46), Expect = 9.589e-19 Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 1 Query: 787 LNK*KGGFLDFNKLIAFTQ*MVNV 858 + K K GFLDF+ +A M +V Sbjct: 101 IEKVKNGFLDFDSAVATPDMMASV 124
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_AGRRK (50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rplA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.124e-18 Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 516 IQNLREG---KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 IQ +REG K Y L AI ++K+ + KF ET E L +DP++ DQ +R V+LP GTG+SV+VAV A+G K DEAK A AD+VG ++L+E ++ Sbjct: 6 IQKIREGVDPTKLYALTQAIGMVKERAIAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGAKADEAKAAGADIVGAEELVEIVQ 103 HSP 2 Score: 22.7126 bits (47), Expect = 1.124e-18 Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 GK+ G++PN K GT T ++ A Sbjct: 126 GKVLGPRGMMPNPKVGTVTMDVKGA 150
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PSEA6 (50S ribosomal protein L1 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rplA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.251e-18 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR +++ E KEYD A++LLK++++ KF E+ + L ID + +DQ +R LP GTGK V+VAV QG + AK A AD+VG +DL EQ+K+ + + + + + L PR PK G V P K K +V+YR + +G+ Sbjct: 5 TKRARLVRDKVEATKEYDFNEAVALLKELATAKFAESVDVAVNLGIDARKSDQNVRGATVLPNGTGKEVRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMNFDVVVASPDAMRVVG-----MLGQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HAEIN (50S ribosomal protein L1 OS=Haemophilus influenzae GN=rplA PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.251e-18 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG+ V+VAV QG D AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HAEIG (50S ribosomal protein L1 OS=Haemophilus influenzae (strain PittGG) GN=rplA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.251e-18 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG+ V+VAV QG D AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HAEIE (50S ribosomal protein L1 OS=Haemophilus influenzae (strain PittEE) GN=rplA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.251e-18 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG+ V+VAV QG D AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HAEI8 (50S ribosomal protein L1 OS=Haemophilus influenzae (strain 86-028NP) GN=rplA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.251e-18 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG+ V+VAV QG D AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |