DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CLOB1 (50S ribosomal protein L1 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.216e-18 Identity = 44/101 (43.56%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 K++ E L + Y ++ AI L+ + S KF ET E RL +DP++ DQQ+R V LP GTGK+V+V V A+G+K +EA+ A AD VG ++L+E+I++ Sbjct: 3 KKYTESVKLVDKNTLYTVQEAIELVTKTSKAKFDETVELAVRLGVDPRHADQQVRGAVVLPHGTGKTVRVLVFAKGDKVNEAQEAGADFVGAEELVEKIQK 103 HSP 2 Score: 23.483 bits (49), Expect = 3.216e-18 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K+GT T ++ +A Sbjct: 126 GRVLGPKGLMPNPKSGTVTFDVAKA 150
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_VIBSL (50S ribosomal protein L1 OS=Vibrio splendidus (strain LGP32) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 59/177 (33.33%), Postives = 91/177 (51.41%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR----------RIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I++ E KEY++ A++LLK++++ KF E+ + L ID + +DQ +R LP GTG+ ++VAV QG + AK A AD+VG +DL EQ+K+ ++ L TI G PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRVIRDKVEVTKEYEINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKAAGADIVGMEDLAEQVKKGEMNFDVVVASPDAMRVVGQLGTILG-----------PRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PECCP (50S ribosomal protein L1 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 57/171 (33.33%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I++ + K+YD+ A++LLK++++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV QG + AK A A+ VG +DL EQIK+ G + + + + + L PR PK+G V P K +V+YR + +G+ Sbjct: 5 TKRMRVIRDKVDVTKQYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAEFVGMEDLAEQIKKGEMGFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVNNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PASMU (50S ribosomal protein L1 OS=Pasteurella multocida GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG+SV+VAV QG + AK A ADLVG +DL E +K+ + + + + + L PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKKMKSIKAAVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMNFDVVIASPDAMRVVG-----QLGQILGPRGLMPNPKVGTVTPNVADAVKNAKSGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ONYPE (50S ribosomal protein L1 OS=Onion yellows phytoplasma GN=rplA PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 60/162 (37.04%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K++L + + KK Y L+ AISL KQ KF E F LN+DPK DQ LR + LP GTGK +KVAV A+GE+ +A+ A+AD VG DLI++I + + + + L P+ PK G V + K+ K K++YR Sbjct: 3 RGKKYLASLQMFDVKKTYPLQEAISLAKQTQVAKFDAAVECAFHLNLDPKKVDQNLRGALVLPHGTGKVLKVAVLAKGEQAKQAQEAQADYVGDQDLIDKIAKNWFDFDVLVATPEMMP-QLSKLGRLLGPKGLMPNPKTGTVTNDVLQAVKEIKNGKIEYR 163
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_MYCCT (50S ribosomal protein L1 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 65/174 (37.36%), Postives = 86/174 (49.43%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR--------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HG 995 SKRF E + E K Y L A+ L KQ ++TKF T E F LNIDP+ DQQ+R V LP GTGK+ +V V K EA+ A+AD+VGG++LI +IK + + L I K L P+ PK G V + K+ KV+YR + G Sbjct: 5 SKRFKEALSKVEKNKVYPLNKALDLAKQTATTKFDSTVEVAFNLNIDPRKADQQIRGAVVLPAGTGKTQRVLV-LTNTKTKEAEQAKADIVGGEELINRIKNENWFDFDIIVATPEMMAKLGAIG--------KILGPKGLMPNPKTGTVTMDVAKAVDDIKKGKVEYRADKEG 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ANASK (50S ribosomal protein L1 OS=Anaeromyxobacter sp. (strain K) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 3 Query: 540 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 K Y L A+SL+KQ ++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV A+G+K EA+ A AD+VG +DL E+I+ + + G K L PR PK+G V R K+ K KV++R Sbjct: 19 KRYKLDEAMSLVKQTATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVFAKGDKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMMG-VVGRLGKILGPRGLMPNPKVGTVTMDLARAVKEQKAGKVEFR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ANADE (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 3 Query: 540 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 K Y L A+SL+KQ ++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV A+G+K EA+ A AD+VG +DL E+I+ + + G K L PR PK+G V R K+ K KV++R Sbjct: 19 KRYKLDEAMSLVKQTATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVFAKGDKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMMG-VVGRLGKILGPRGLMPNPKVGTVTMDLARAVKEQKAGKVEFR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ANAD2 (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=rplA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.639e-18 Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = 3 Query: 540 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 K Y L A+SL+KQ ++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV A+G+K EA+ A AD+VG +DL E+I+ + + G K L PR PK+G V R K+ K KV++R Sbjct: 19 KRYKLDEAMSLVKQTATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVFAKGDKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMMG-VVGRLGKILGPRGLMPNPKVGTVTMDLARAVKEQKAGKVEFR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLAD (50S ribosomal protein L1 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.177e-18 Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 K++L + + Y AI+L+K+ S TKF T EAH RL IDP++ DQ +R TV+LP GTGK+V+V V AQGE A +A AD G DDLI +I R Sbjct: 6 KKYLAALAKVDRSRFYTPAEAIALVKETSYTKFDATVEAHLRLGIDPRHADQNIRTTVALPHGTGKTVRVLVFAQGEALQTALDAGADYAGSDDLIARIDR 106 HSP 2 Score: 20.4014 bits (41), Expect = 4.177e-18 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 890 GLLPNSKAGT 919 GL+PN K+GT Sbjct: 136 GLMPNPKSGT 145 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |