DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_THETH (50S ribosomal protein L1 OS=Thermus thermophilus GN=rplA PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN 986 KR+ + + K Y + A L+K++++ KF ET E H +L IDP+ +DQ +R TVSLP G GK V+V A+GEK EA+ A AD VGG+++I++I + G + L PR PK G V ++ K ++++R + Sbjct: 6 KRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRND 167
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_THET2 (50S ribosomal protein L1 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rplA PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN 986 KR+ + + K Y + A L+K++++ KF ET E H +L IDP+ +DQ +R TVSLP G GK V+V A+GEK EA+ A AD VGG+++I++I + G + L PR PK G V ++ K ++++R + Sbjct: 6 KRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRND 167
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_SILPO (50S ribosomal protein L1 OS=Silicibacter pomeroyi GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 534 GKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 GK+E ++ A++L+K +S KF ET E L +DP++ DQ +R V LP GTGK+V+VAV A+G K +EA+ A AD+VG +DL+E I+ ++ C+ T + + K L PR+ PK+G V + + K +V+++ Sbjct: 17 GKEELSVEQAVALIKSAASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARGPKAEEAQAAGADIVGAEDLMETIQS--GKIEFDRCIATPDMMPVVGRLGKILGPRNLMPNPKVGTVTMDVAQAVQNAKGGEVQFK 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_RHOPT (50S ribosomal protein L1 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 59/159 (37.11%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 516 IQNLREG---KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 ++ +REG K Y L A+ L+K+ + +KF ET E L +DP++ DQ +R V LP GTG++V+V V A+G K DEAK A AD+VG +DL+EQ+ + + C+ T + + K L PR PK+G V K K V++R Sbjct: 7 LKKIREGIDRTKLYPLDEAVKLVKERAISKFDETIEVAINLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGAKADEAKAAGADVVGAEDLVEQV--QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDVAGAVKGAKGGSVEFR 163
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_RHOPA (50S ribosomal protein L1 OS=Rhodopseudomonas palustris GN=rplA PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 59/159 (37.11%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 516 IQNLREG---KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 ++ +REG K Y L A+ L+K+ + +KF ET E L +DP++ DQ +R V LP GTG++V+V V A+G K DEAK A AD+VG +DL+EQ+ + + C+ T + + K L PR PK+G V K K V++R Sbjct: 7 LKKIREGIDRTKLYPLDEAVKLVKERAISKFDETIEVAINLGVDPRHADQMVRGVVMLPNGTGRTVRVGVFARGAKADEAKAAGADVVGAEDLVEQV--QAGNINFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKIGTVTMDVAGAVKGAKGGSVEFR 163
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PROMH (50S ribosomal protein L1 OS=Proteus mirabilis (strain HI4320) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 56/171 (32.75%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I+ + K+Y++ A++LLK++++ KF E+ + L ID + +DQ +R LP GTG+SV+VAV AQG + AK A A+LVG DDL ++K + + + + + L PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRNIREKVDVVKQYEINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFAQGANAEAAKEAGAELVGMDDLAAKVKAGEMDFDVVIASPDAMRVVG-----QLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_POLSQ (50S ribosomal protein L1 OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 63/174 (36.21%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR-------RIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR IQ+ + K Y L+ A++L+K+ ++ KF E+ + +L ID K +DQ +R V LP GTGK V+VAV AQGEK ++AK A A++VG ++L EQIK I + T+ + L PR PK+G V P K K +V++R + G+ Sbjct: 5 SKRVKAIQSKVDRNKFYPLEDALNLVKECATAKFDESIDVAVQLGIDAKKSDQVVRGAVVLPAGTGKHVRVAVFAQGEKAEQAKAAGAEIVGMEELAEQIKGGKIDFDILIASPDTMKIVGTLG--------QVLGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HAMD5 (50S ribosomal protein L1 OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR I+ + K+YDL A LLK++++ KFTE+ + L ID + +DQ +R LP GTG+SV+VAV QG + A NA A+LVG DDL QI+ + + + + + L PR PK+G V P K +++YR + +G+ Sbjct: 5 SKRMRVIREKVDTAKQYDLDDAFLLLKKLATAKFTESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAANNAGAELVGMDDLAAQIRNGEMNFDVVIASPDAMRVVG-----QLGQILGPRGLMPNPKVGTVTPNIAEAVTNAKAGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_GLUDA (50S ribosomal protein L1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 61/169 (36.09%), Postives = 90/169 (53.25%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 ++KR Q + K Y L AI+L+KQ+++ KF ET E L IDP++ DQ +R +SLP GTGK+++V V A+G K +EA A AD+VG +DL E+++ + C+ T + + K L PR PKLG V K +V+YR G+ Sbjct: 3 KNKRLTAAQATVDRNKAYGLDEAIALVKQVATAKFDETIEISLNLGIDPRHADQMVRGLLSLPNGTGKTLRVGVFARGAKAEEALAAGADVVGAEDLAEKVQAGEIAFDR--CIATPDMMALVGRLGKILGPRGLMPNPKLGTVTMDVKGAVTAAKSGQVEYRAEKAGI 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_DESAP (50S ribosomal protein L1 OS=Desulforudis audaxviator (strain MP104C) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 54/160 (33.75%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 K+++E + +K+Y+++ A+ L+++++ KF ET EA +L +DP++ DQQ+R V LP GTGK+ V V A+GEK EA+ A AD VGG++++ +I+ A + + L PR PK G V R + K K++YR Sbjct: 6 KKYVEAAKQVDSEKQYEVREALELVRKLAPAKFDETVEAAVKLGVDPRHADQQVRGAVVLPHGTGKTRTVLVFAKGEKVTEAEKAGADYVGGEEMVAKIQGGWMEFDVAIATPDMMS-AVGKIGRILGPRGLMPNPKTGTVTFDIARAVAEVKAGKIQYR 164 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |