DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_AYWBP (50S ribosomal protein L1 OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=rplA PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 60/162 (37.04%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K++L + + KK Y L+ AISL KQ KF T E F LN+D K DQ LR + LP GTGK +KVAV A+GE+ +A+ A+AD VG DLI++I + + + + L P+ PK G V + K+ K K++YR Sbjct: 3 RGKKYLTSLRIFDVKKTYPLQEAISLAKQTQVAKFDATVECAFHLNLDLKKVDQNLRGALVLPHGTGKVLKVAVLAKGEQAKQAQEAQADYVGDQDLIDKIAKNWFDFDVLVATPEMMP-QLSKLGRLLGPKGLMPNPKTGTVTNDVLQAVKEIKNGKIEYR 163
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ARTAT (50S ribosomal protein L1 OS=Arthrobacter aurescens (strain TC1) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 62/166 (37.35%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*H 992 RSK + E K Y AI+L K + +KF T E FRL +DP+ DQ +R TV+LP GTGK+ +V V A G+K + A A AD VG DDLIE+I A + G + K L PR+ PK G V P + K K+ +R + H Sbjct: 4 RSKAYEAAVAKIEADKVYAPIEAITLAKDTNPSKFDATVEVAFRLGVDPRKADQMVRGTVNLPHGTGKTARVLVFATGDKAEAAIAAGADFVGSDDLIEKIAAGWTDFDAAVATPDLMG-KVGRLGKVLGPRNLMPNPKTGTVTPDVTKAVNDIKGGKIDFRVDKH 168
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ACTP7 (50S ribosomal protein L1 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 56/171 (32.75%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG++ +VAV QG + AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_ACTP2 (50S ribosomal protein L1 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rplA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-17 Identity = 56/171 (32.75%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K+ I+ + K Y++ AI++LKQ ++ KF E+ + L IDP+ +DQ +R LP GTG++ +VAV QG + AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_FRAP2 (50S ribosomal protein L1 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.554e-17 Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 SKR EI + +K+Y + A +L+ +SS KF E+ + L +DP+ +DQ +R LP GTGK+V+VAV A+G D AK A AD+VG +DL +++K+ Sbjct: 5 SKRMKEISAKIDAEKKYPVSEAFDILRDVSSVKFVESVDVSVALGVDPRKSDQVVRGASVLPNGTGKTVRVAVFAKGPAADAAKEAGADVVGMEDLADEVKK 106 HSP 2 Score: 23.483 bits (49), Expect = 1.554e-17 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G+I GL+PN K GT T ++ +A Sbjct: 128 GQILGPKGLMPNPKVGTVTMDVAKA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CLOD6 (50S ribosomal protein L1 OS=Clostridium difficile (strain 630) GN=rplA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.554e-17 Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 + KR+ + K YD A++L+ ++ KF ET EAH +L +D ++ DQQ+R V LP GTGK+ +V V A+GEK EA+ A AD VG ++L+++I+ Sbjct: 4 KGKRYAGALQKVDRTKFYDASEALTLVSDIAGAKFDETVEAHIKLGVDSRHADQQVRGAVVLPHGTGKTKRVLVFAKGEKAKEAEQAGADFVGAEELVQKIQ 105 HSP 2 Score: 23.483 bits (49), Expect = 1.554e-17 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K+GT T ++ +A Sbjct: 129 GRVLGPKGLMPNPKSGTVTFDVAKA 153
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_VIBPA (50S ribosomal protein L1 OS=Vibrio parahaemolyticus GN=rplA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.806e-17 Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR----------RIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I+ + KEY++ A++LL+++++ KF E+ + L ID + +DQ +R LP GTG+ ++VAV QG + AK A AD+VG +DL EQ+K+ ++ L TI G PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRVIREKVDVTKEYEINEAVALLQELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRDIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMNFDVVVASPDAMRVVGQLGTILG-----------PRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_VIBHB (50S ribosomal protein L1 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rplA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.806e-17 Identity = 57/177 (32.20%), Postives = 90/177 (50.85%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR----------RIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I+ + KEY++ A++LL+++++ KF E+ + L ID + +DQ +R LP GTG+ ++VAV QG + AK A AD+VG +DL EQ+K+ ++ L TI G PR PK+G V P K K +V+YR + +G+ Sbjct: 5 TKRMRVIREKVDVTKEYEINEAVALLQELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMNFDVVVASPDAMRVVGQLGTILG-----------PRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_TERTT (50S ribosomal protein L1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rplA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.806e-17 Identity = 60/171 (35.09%), Postives = 86/171 (50.29%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I + K Y + A++LLK++S+ KF ET +A L IDP+ +DQ +R SLP GTGK V+VAV QG D AK A A+ VG +DL +QIK + + + + + L PR PK G V P K K +V++R + G+ Sbjct: 5 TKRQKAINEKVDFNKAYGIDEAVALLKELSTVKFPETVDAAINLGIDPRKSDQAVRGATSLPHGTGKDVRVAVFTQGAAADAAKEAGAEFVGMEDLADQIKGGMMDFDVVIADPAAMRVVGA-----LGQILGPRGLMPNPKTGTVTPDVAGAVKNAKAGQVRFRADKGGV 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_RALPJ (50S ribosomal protein L1 OS=Ralstonia pickettii (strain 12J) GN=rplA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.806e-17 Identity = 64/174 (36.78%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR + E K Y + A+SL+K+ +S KF E+ + +L ID K +DQ +R +V LP GTGKSV+VAV AQG+K ++AK A A++VG +DL EQIK I + T+ + L PR PK+G V P K K +V++R + G+ Sbjct: 5 SKRAAANKAKVERTKFYPIDEALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGDKAEQAKAAGAEIVGMEDLAEQIKAGKMDFDVVIASPDTMRVVGTLG--------QILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGI 170 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |