DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_NITEC (50S ribosomal protein L1 OS=Nitrosomonas eutropha (strain C91) GN=rplA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.020e-17 Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 S+R+ EI + + Y L A++L+K++++ KF E+ + L ID + +DQ +R V LP GTGK+V+VAV AQG+K EA +A AD+VG +DL EQ+K Sbjct: 5 SRRYKEIAQKIDRDRLYPLTDALALVKEVATAKFDESVDIAINLGIDVRKSDQVVRGAVVLPSGTGKTVRVAVFAQGDKAKEALDAGADIVGLEDLAEQVK 105 HSP 2 Score: 23.0978 bits (48), Expect = 2.020e-17 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G+I GL+PN K GT T ++ A Sbjct: 128 GQILGPRGLMPNPKVGTVTLDVASA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACSK (50S ribosomal protein L1 OS=Bacillus clausii (strain KSM-K16) GN=rplA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.020e-17 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 + K++ + L + Y + A+ L+K+ S KF ET E RL +DPK DQQ+R V LP GTGK+ +V V A+GEK EA+ A AD VG DDLI +I + Sbjct: 4 KGKKYADALKLVDRDTAYQAEEALELVKKTSVAKFDETVEVAVRLGVDPKKADQQIRGAVVLPHGTGKTQRVLVFAKGEKAKEAEAAGADYVGEDDLINKINQ 106 HSP 2 Score: 23.0978 bits (48), Expect = 2.020e-17 Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K GT T ++ +A Sbjct: 128 GRVLGPKGLMPNPKTGTVTFDVTKA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PSYWF (50S ribosomal protein L1 OS=Psychrobacter sp. (strain PRwf-1) GN=rplA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.020e-17 Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 +KR I E +K Y L+ A+S+L + KF E+ + L +DP+ +DQ +R +LP GTGK+ +VAV AQG D AK A AD+VG DDL EQ+K Sbjct: 5 TKRQKMIAERVESQKLYTLEEAVSILNDLPPLKFKESVDIAINLGVDPRKSDQVVRGATNLPAGTGKTKRVAVFAQGAAADAAKEAGADVVGMDDLAEQVK 105 HSP 2 Score: 25.0238 bits (53), Expect = 2.020e-17 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 890 GLLPNSKAGTGTTNLPQA 943 GL+PN K GT T N+ +A Sbjct: 135 GLMPNPKVGTVTPNVAEA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_LACS1 (50S ribosomal protein L1 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rplA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.021e-17 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 489 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 + +SK++LE E K Y+ A L+K++ F T E F LN+D K DQQLR + LP GTGK V V A+G K EAK+A AD+VG DDL+ +I+ Sbjct: 3 KKKSKKYLEAAKQVEEGKLYNASEAFGLVKKIDFANFDATIEVAFNLNVDTKQADQQLRGAMVLPNGTGKDQTVVVFAKGAKAQEAKDAGADVVGDDDLVARIQ 106 HSP 2 Score: 23.483 bits (49), Expect = 2.021e-17 Identity = 10/25 (40.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K GT T ++ +A Sbjct: 129 GRVLGPKGLMPNPKTGTVTMDVTKA 153
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_SULSY (50S ribosomal protein L1 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.359e-17 Identity = 62/169 (36.69%), Postives = 86/169 (50.89%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSST---KFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK----EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K++LE L + +K Y L AI LK++ KF ET E FRL +DPKY DQ +R +V LP G G+ +KV V A GEK EA+ A AD GG+++I +I + I PK K L PR PK+G V R + K+ +V+++ Sbjct: 4 RGKKYLEALKLIDKEKTYSLDEAIQKLKEVEKILQRKFDETVELIFRLGVDPKYADQMVRGSVVLPHGLGRELKVLVIASGEKLKEAEEAGADYAGGEEIINKIANE----NWIDFDIVIATPDMMPKLAKLGKILGPRGLMPNPKVGTVTTDVKRAVTEAKKGRVEFK 168
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_RHOS5 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rplA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.359e-17 Identity = 58/149 (38.93%), Postives = 85/149 (57.05%), Query Frame = 3 Query: 480 KRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLV 923 KR R + F+ GK ++ A++L+K +S KF ET E L +DP++ DQ +R V+LP GTGK+V+VAV A+G K DEAK A AD+VG +DL+E I+ ++ C+ T + + K L PR+ PK+G V Sbjct: 6 KRTRAAREAFV-------GKDMVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAVFARGAKADEAKAAGADIVGAEDLMETIQS--GKIEFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTV 145
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BURS3 (50S ribosomal protein L1 OS=Burkholderia sp. (strain 383) GN=rplA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.359e-17 Identity = 60/161 (37.27%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 537 KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K Y ++ A+SL+K+ +S KF E+ + +L ID K +DQ +R +V LP GTGKSV+VAV AQGEK ++A+ A A++VG +DL EQIK I + T+ + L PR PK+G V P K K +V++R + G+ Sbjct: 18 QKLYAIEEALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGEKAEQARAAGAEIVGMEDLAEQIKAGQMDFDIVIASPDTMRIVGTLG--------QILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BURCJ (50S ribosomal protein L1 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=rplA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.359e-17 Identity = 60/161 (37.27%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 537 KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K Y ++ A+SL+K+ +S KF E+ + +L ID K +DQ +R +V LP GTGKSV+VAV AQGEK ++A+ A A++VG +DL EQIK I + T+ + L PR PK+G V P K K +V++R + G+ Sbjct: 18 QKLYAIEDALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGEKAEQARAAGAEIVGMEDLAEQIKAGQMDFDIVIASPDTMRIVGTLG--------QILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BURCH (50S ribosomal protein L1 OS=Burkholderia cenocepacia (strain HI2424) GN=rplA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.359e-17 Identity = 60/161 (37.27%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 537 KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K Y ++ A+SL+K+ +S KF E+ + +L ID K +DQ +R +V LP GTGKSV+VAV AQGEK ++A+ A A++VG +DL EQIK I + T+ + L PR PK+G V P K K +V++R + G+ Sbjct: 18 QKLYAIEDALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGEKAEQARAAGAEIVGMEDLAEQIKAGQMDFDIVIASPDTMRIVGTLG--------QILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BURCC (50S ribosomal protein L1 OS=Burkholderia cenocepacia (strain MC0-3) GN=rplA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.359e-17 Identity = 60/161 (37.27%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 537 KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +K Y ++ A+SL+K+ +S KF E+ + +L ID K +DQ +R +V LP GTGKSV+VAV AQGEK ++A+ A A++VG +DL EQIK I + T+ + L PR PK+G V P K K +V++R + G+ Sbjct: 18 QKLYAIEDALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGEKAEQARAAGAEIVGMEDLAEQIKAGQMDFDIVIASPDTMRIVGTLG--------QILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGI 170 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |