DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACCR (50S ribosomal protein L1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.997e-16 Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K+++E L + Y A+ L+K+ ++ KF T EA FRL +DPK DQQ+R V LP GTGK +V V A+GEK EA+ A AD VG D I +I++ + G + L P+ PK G V + + K KV+YR Sbjct: 6 RGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDTDYIGKIQQGWFDFDVVVATPDMMG-EVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYR 166
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACC4 (50S ribosomal protein L1 OS=Bacillus cereus (strain B4264) GN=rplA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.997e-16 Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K+++E L + Y A+ L+K+ ++ KF T EA FRL +DPK DQQ+R V LP GTGK +V V A+GEK EA+ A AD VG D I +I++ + G + L P+ PK G V + + K KV+YR Sbjct: 4 RGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDTDYIGKIQQGWFDFDVVVATPDMMG-EVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACC2 (50S ribosomal protein L1 OS=Bacillus cereus (strain G9842) GN=rplA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.997e-16 Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K+++E L + Y A+ L+K+ ++ KF T EA FRL +DPK DQQ+R V LP GTGK +V V A+GEK EA+ A AD VG D I +I++ + G + L P+ PK G V + + K KV+YR Sbjct: 4 RGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDTDYIGKIQQGWFDFDVVVATPDMMG-EVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_AZOSB (50S ribosomal protein L1 OS=Azoarcus sp. (strain BH72) GN=rplA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.997e-16 Identity = 59/168 (35.12%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR ++ + + Y + A++L+K+ ++ KF E+ + L +D + +DQ +R +V LP GTGK+V+VAV AQG+K + A+ A AD+VG DDL EQ+K + C+ T + R + + L PR PK+G V K K +V+YR + GL Sbjct: 5 SKRVQALRAKVDRNRIYPVAEALALVKECATAKFDESIDVAVNLGVDARKSDQVVRGSVVLPAGTGKTVRVAVFAQGDKAEAARAAGADVVGFDDLAEQVKGGT--IDFDLCIATPDAMRVVGQLGQILGPRGLMPNPKVGTVTMDVTTAVKNAKAGQVQYRTDKGGL 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_DEHSB (50S ribosomal protein L1 OS=Dehalococcoides sp. (strain BAV1) GN=rplA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.141e-16 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 492 TRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 T K++ + L + Y AI L K+MS+ KF ET E H ++ +DPK QQLR LP G GK+V+V V AQGE A+ A AD+ GGD+LI++I+ Sbjct: 3 THGKKYQDAIKLLDQSAAYAPAEAIDLAKKMSAAKFDETVEMHLKMGLDPKNATQQLRGVAVLPHGLGKTVRVLVFAQGEAEKAAQVAGADVYGGDELIKKIE 105 HSP 2 Score: 22.3274 bits (46), Expect = 2.141e-16 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGT 919 GK+ GL+PN K+GT Sbjct: 128 GKVLGRRGLMPNPKSGT 144
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CLOTE (50S ribosomal protein L1 OS=Clostridium tetani GN=rplA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.143e-16 Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 K + E L + Y + A++L+ + S F ET + RL +DP++ DQQ+R + LP GTGK VKV V A+GEK EA+ A AD VG ++L+E+I++ Sbjct: 3 KNYAESAKLIDKSTLYSSEEAMNLVVKTSKANFDETIDLAVRLGVDPRHADQQVRGAIILPHGTGKKVKVLVFAKGEKAKEAEAAGADFVGAEELVEKIQK 103 HSP 2 Score: 23.483 bits (49), Expect = 2.143e-16 Identity = 10/25 (40.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G++ GL+PN K+GT T ++ +A Sbjct: 126 GRVLGPKGLMPNPKSGTVTFDVAKA 150
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_MYCS2 (50S ribosomal protein L1 OS=Mycobacterium smegmatis GN=rplA PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.608e-16 Identity = 59/161 (36.65%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 SK + E + K Y A L K+ SS K T E RL +DP+ DQ +R TV+LP GTGK+ +VAV A GEK ++A+ A AD+VG DDLIE+I+ A + + L PR PK G V P + + K K+ +R Sbjct: 5 SKAYREAAEKVDRTKLYTPLEAAKLAKETSSKKQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAEQAQAAGADIVGSDDLIEKIQGGFLDFDAAIATPDQMA-KVGRIARVLGPRGLMPNPKTGTVTPDVAKAVQDIKGGKINFR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_KINRD (50S ribosomal protein L1 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=rplA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.608e-16 Identity = 54/166 (32.53%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*H 992 RSK + + ++ Y A+ L ++ S+ K+ T E FRL +DP+ DQ +R TV+LP GTGK+ +V V A G++ +A+ A AD+VGGD+LI+++ + A + G + K L PR PK G V + + K K+++R + H Sbjct: 3 RSKSYRAAAEKIDFEELYAPLDAVKLARETSTVKYDATVEVAFRLGVDPRKADQMVRGTVNLPHGTGKTARVLVFAVGDRAAQAEAAGADIVGGDELIDEVAKGRLDFDAAVATPDLMG-KVGRLGKVLGPRGLMPNPKTGTVTMDVAKAVSEIKGGKIEFRTDKH 167
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BART1 (50S ribosomal protein L1 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.608e-16 Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 +KR I+ + + Y L A+S++K+ + KF ET E L +DP++ DQ +R LP GTG++++VAV A+G+K +EAK A AD+VG +DL E I + + C+ T + + K L PR PK+G V K K V++R Sbjct: 5 AKRIKNIRKDVDFNQLYALNDAVSMVKERAVAKFDETIEISMNLGVDPRHADQMVRGVAHLPNGTGRNIRVAVFARGDKAEEAKAAGADIVGAEDLFESINGGV--IDFDRCIATPDMMPLVGRLGKILGPRSLMPNPKVGTVTLDVAGAVKASKGGAVEFR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BACHK (50S ribosomal protein L1 OS=Bacillus thuringiensis subsp. konkukian GN=rplA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.608e-16 Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 R K+++E L + Y A+ L+K+ ++ KF T EA FRL +DPK DQQ+R V LP GTGK +V V A+GEK EA+ A AD VG D I +I++ + G + L P+ PK G V + + K KV+YR Sbjct: 4 RGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAVVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKIQQGWFDFDVVVATPDMMG-EVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYR 164 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |