DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PHYAS (50S ribosomal protein L1 OS=Phytoplasma australiense GN=rplA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.835e-21 Identity = 65/180 (36.11%), Postives = 92/180 (51.11%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-------------IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HG 995 RSK++L + + + KK Y L+ AI L KQ TKF T E F LN+DPK DQ LR + LP GTGK++K+AV A+GE+ AK A+AD VG +DLIE+I + +P L + + L P+ PK G V + + K K++YR + +G Sbjct: 3 RSKKYLAVSQMFDIKKRYPLQEAIKLTKQSQITKFDATVECAFHLNLDPKKADQNLRGALVLPHGTGKTLKLAVIAKGEQAKIAKEAQADYVGDEDLIEKISKNWFDFDVLVSTPEMMPQLSKLG--------------RLLGPKGLMPNPKTGTVTDNVGQAVSEIKNGKIEYRLDKNG 168
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CAMC1 (50S ribosomal protein L1 OS=Campylobacter concisus (strain 13826) GN=rplA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.835e-21 Identity = 64/166 (38.55%), Postives = 88/166 (53.01%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HG 995 SKRF E+ E K Y+L AI +K ++S KF ET E +LN+DP++ DQ +R +V LP GTGK V+VAV A+ K DEAK A AD+VG DDL+E I++ I + G + L P+ PK G V + K +V +R + G Sbjct: 5 SKRFQELLKKVEQDKIYNLSEAIDTVKTLASAKFNETVEIALKLNVDPRHADQMVRGSVVLPAGTGKVVRVAVIAKDAKADEAKAAGADIVGADDLVEDIQKGIMNFDVLIATPNLMG-LVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQG 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_THELT (50S ribosomal protein L1 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.023e-20 Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRR-----IPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLCPH 1007 S+R+ EI+ + + Y + AI L+KQ ++ KF ET E H NID K +QQ+R+TV+LP GTGK V+V V A+G+K + AKNA AD VGGD+L+E+I + + + +I K L PR PK G V K FK +++ R + G C H Sbjct: 5 SRRYQEIRQKVDRTRFYSVDDAIELVKQTATAKFDETVELHLSTNIDTKRPEQQVRSTVTLPHGTGKRVRVLVFAKGDKAEAAKNAGADYVGGDELVEKITNENFTDFDVAIATPDMMRSIG-----KLGKILGPRGLMPSPKSGTVTEDVETAVKAFKMGRIEVRNDKTG-CIH 173
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PROM5 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.023e-20 Identity = 68/171 (39.77%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK----EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKR + E + L+ A++++K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV GE +AK+A ADL G +DL+E I + G + L I PK + L PR PK G V K+FK K+++R + G+ Sbjct: 5 SKRMTALSTKIEDRTYAPLE-ALAIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVAKAKSAGADLFGEEDLVESINK---GNMDFDLL--IATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTSDIASAIKEFKAGKLEFRADKAGI 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_PROMS (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain AS9601) GN=rplA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.336e-20 Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 561 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK----EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 A+S++K+ ++ KF ET EAH RL IDPKY DQQLR TV LP GTG+S+K+AV GE +AK A ADL G +DL+E I + G + + L I PK + L PR PK G V K+FK K+++R + G+ Sbjct: 25 ALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVVLPHGTGQSIKIAVITSGENVSKAKAAGADLFGEEDLVESINK---GNMEFDLL--IATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAGKLEFRADKAGI 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLCV (50S ribosomal protein L1 OS=Chlamydophila caviae GN=rplA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.336e-20 Identity = 61/167 (36.53%), Postives = 90/167 (53.89%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR I + K Y L+ AI +LKQ + +F +T + +L IDPK +DQQ+R +VSLP GTGK++K+ V A GEK EA +A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGILKSYDFSKSYSLQEAIDILKQCPTVRFDQTVDVSIKLGIDPKKSDQQIRGSVSLPNGTGKTLKILVFAAGEKAKEALDAGADFVGSDDLVERIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTMDVTKAIAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HELAH (50S ribosomal protein L1 OS=Helicobacter acinonychis (strain Sheeba) GN=rplA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.676e-20 Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIK 800 K F +IQN K Y ++ + +K ++S KF ET E RL +DP++ DQ +R V LP GTGK V+VAV A+ K DEAKNA AD+VGGDDL E+IK Sbjct: 11 KLFSKIQN----DKVYGVEQGVGAVKSLASAKFDETVEVALRLGVDPRHADQMVRGAVVLPHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEIK 106 HSP 2 Score: 24.2534 bits (51), Expect = 1.676e-20 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 G+I GL+PN K GT T ++ +A Sbjct: 129 GRILGPKGLMPNPKTGTVTMDIAKA 153
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_SYNP2 (50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.745e-20 Identity = 49/88 (55.68%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 540 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKR 803 + Y+ A++LLK+ ++ KF ETAEAH RL IDPKY DQQLR TV+ PKGTG+SV+VAV GE+ A+ + ADLVG ++LIE I++ Sbjct: 19 RAYEPLEALTLLKETATAKFDETAEAHIRLGIDPKYTDQQLRTTVAFPKGTGQSVRVAVITSGEQVKVAEESGADLVGSEELIEDIQK 106
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLFF (50S ribosomal protein L1 OS=Chlamydophila felis (strain Fe/C-56) GN=rplA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.745e-20 Identity = 60/167 (35.93%), Postives = 90/167 (53.89%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR I + K Y L+ AI +LKQ + +F +T + +L IDPK +DQQ+R +VSLP GTGK++++ V A GEK EA +A AD VG DDL+E+IK A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRSILKSYDFSKSYSLQEAIDILKQCPTVRFDQTVDVSIKLGIDPKKSDQQIRGSVSLPNGTGKTLRILVFAAGEKAKEALDAGADFVGSDDLVEKIKGGWVDFDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTTDVVKAIAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CAMC5 (50S ribosomal protein L1 OS=Campylobacter curvus (strain 525.92) GN=rplA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.745e-20 Identity = 62/166 (37.35%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HG 995 +KRF E+ E K Y+L AI+ +K ++S KF ET E +LN+DP++ DQ +R +V LP GTGK+V+VAV A+ K DEAK A AD+VG D+L+E I++ I + G + L P+ PK G V + K +V +R + G Sbjct: 5 TKRFQELLKKVEENKIYNLDEAITTIKTLASAKFDETVEIALKLNVDPRHADQMVRGSVVLPAGTGKTVRVAVIAKDAKADEAKAAGADIVGSDELVEDIQKGIMNFDVLIATPNLMG-LVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQG 169 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |