DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BRUA2 (50S ribosomal protein L1 OS=Brucella abortus (strain 2308) GN=rplA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.120e-20 Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIE 791 SKR +I+ + K YDL AI L+K+ + KF ET E L +DP++ DQ +R V+LP GTG++V+VAV A+G+K +EAK A AD+VG ++L E Sbjct: 5 SKRINKIREGVDRNKLYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE 102 HSP 2 Score: 25.409 bits (54), Expect = 8.120e-20 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 GK+ G++PN K GT TT++ A Sbjct: 128 GKVLGPRGMMPNPKVGTVTTDVAAA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BRUA1 (50S ribosomal protein L1 OS=Brucella abortus (strain S19) GN=rplA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.120e-20 Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIE 791 SKR +I+ + K YDL AI L+K+ + KF ET E L +DP++ DQ +R V+LP GTG++V+VAV A+G+K +EAK A AD+VG ++L E Sbjct: 5 SKRINKIREGVDRNKLYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE 102 HSP 2 Score: 25.409 bits (54), Expect = 8.120e-20 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 GK+ G++PN K GT TT++ A Sbjct: 128 GKVLGPRGMMPNPKVGTVTTDVAAA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_SYNS9 (50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9902) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.662e-20 Identity = 64/157 (40.76%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 540 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK----EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 + Y AI+L+K ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG++V++AV GEK AK A A+L G +DL+E I + + N I PK + L PR PK G V K FK K+++R + G+ Sbjct: 18 RTYGPLEAIALVKDNANAKFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQTVRIAVVTSGEKVAAAKAAGAELAGDEDLVEAISK-----GEMNFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLAAAIKDFKAGKLEFRADRTGI 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_SELRU (50S ribosomal protein L1 OS=Selenomonas ruminantium GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.662e-20 Identity = 62/160 (38.75%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 K++ + L E K Y A+ L+K+ ++ KF ET E H RL +DPKY DQQ+R + LP GTGKS +V V A+GEK EA+ A AD VG D+++++I+ A + G K L PR PKLG V + + K KV+YR Sbjct: 6 KKYQDACKLVEAGKFYTAAEAMELVKKTATKKFDETIELHVRLGVDPKYADQQVRGAMVLPHGTGKSKRVLVFAKGEKVKEAEAAGADFVGSDEIVQKIQGGWLDFDVAVATPDMMG-TVGRLGKVLGPRGLMPNPKLGTVTMDLTKAVSEIKAGKVEYR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_HAES1 (50S ribosomal protein L1 OS=Haemophilus somnus (strain 129Pt) GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.662e-20 Identity = 61/171 (35.67%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPG----LQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 +KR I+ + K+Y++ AI++LKQ +STKF E+ + L ID + +DQ +R LP GTG+SV+VAV QG D AK A ADLVG +DL EQIK+ + + + + + L PR PK+G V P K K +++YR + +G+ Sbjct: 5 TKRMKAIKAGVDSTKQYEINEAITVLKQFTSTKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANVDAAKAAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVG-----QLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CHLAB (50S ribosomal protein L1 OS=Chlamydophila abortus GN=rplA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 8.662e-20 Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGLC 1001 KR I + K Y L+ AI +LKQ +F +T + +L IDPK +DQQ+R +VSLP GTGK++K+ V A GEK EA +A AD VG DDL+E+I+ A + K L PR+ PK G V + + ++ K++++ + G+C Sbjct: 6 KRIRGILKSYDFSKSYSLQEAIDILKQCPPVRFDQTVDVSIKLGIDPKKSDQQIRGSVSLPHGTGKTLKILVFAAGEKAKEALDAGADFVGSDDLVEKIRGGWVDCDVAVATPDMMR-EVGKLGKVLGPRNLMPTPKAGTVTMDVTKTIAELRKGKIEFKADRAGVC 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_OCHA4 (50S ribosomal protein L1 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.056e-19 Identity = 46/98 (46.94%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIE 791 SKR +I+ + K YDL AI L+K+ + KF ET E L +DP++ DQ +R V+LP GTG++V+VAV A+G+K +EAK A AD+VG ++L E Sbjct: 5 SKRINKIREGVDRNKLYDLSAAIGLVKERAVAKFDETIEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE 102 HSP 2 Score: 25.409 bits (54), Expect = 1.056e-19 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 GK+ G++PN K GT TT++ A Sbjct: 128 GKVLGPRGMMPNPKVGTVTTDVAAA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_BRUME (50S ribosomal protein L1 OS=Brucella melitensis GN=rplA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.056e-19 Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIE 791 SKR +I + K YDL AI L+K+ + KF ET E L +DP++ DQ +R V+LP GTG++V+VAV A+G+K +EAK A AD+VG ++L E Sbjct: 5 SKRINKIHEGVDRNKLYDLSAAIGLVKERAVAKFDETVEIAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFARGDKAEEAKKAGADIVGAEELFE 102 HSP 2 Score: 25.409 bits (54), Expect = 1.056e-19 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 869 GKIP*TTGLLPNSKAGTGTTNLPQA 943 GK+ G++PN K GT TT++ A Sbjct: 128 GKVLGPRGMMPNPKVGTVTTDVAAA 152
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_MOOTA (50S ribosomal protein L1 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.131e-19 Identity = 61/160 (38.12%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYR 980 KR+ E+ L ++ Y+ AI LLK+ +S KF ET E +L +DP++ DQQ+R TV LP GTGK+ +V V A+G+K EA+ A AD VG +DL+E+I+ A + G + L PR PK G V R K+ K K+++R Sbjct: 6 KRYREVSKLVSRQELYEPDEAIELLKKTASAKFDETVEVAVKLGVDPRHADQQVRGTVVLPNGTGKTRRVLVFAKGDKAKEAEEAGADFVGAEDLVEKIQGGWLDFDVAIATPDMMG-LVGRLGRILGPRGLMPNPKAGTVTMDIARAVKEVKAGKIEFR 164
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_DEIGD (50S ribosomal protein L1 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.131e-19 Identity = 56/166 (33.73%), Postives = 89/166 (53.61%), Query Frame = 3 Query: 501 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 KR+ + + ++Y + A +L+K +++ KF ET E HFRL IDP+ +DQ +R TV+LP GTGK+V+VAV +G+ A+ A AD+VGG+DLI++I + + L PR PK G V P + K ++++R + G+ Sbjct: 6 KRYRALIEKVDRNRQYSIDEAAALVKDLATAKFDETVEVHFRLGIDPRKSDQNVRGTVALPHGTGKTVRVAVITKGDNVAAAEAAGADVVGGEDLIDRIANGFMDFDAVVATPDMMAQIGQKLARLLGPRGLLPNPKSGTVGPDVAGMVRGLKAGRIEFRNDKTGV 171 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |