DT214601

Overview
NameDT214601
Unique NameDT214601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_BACSU (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Bacillus subtilis GN=pdhC PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18
Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGS-AEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A  TE GL VPV+++AD+K +  I++E+  LA KA++  L P + +G + T+TN+G   G + F  +IN P+  IL +G  AEK +V      +   +  ++++LS DHR+IDGA     L   K  + +P+ +L+
Sbjct:  305 NIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKAREGKLAPAEMKGASCTITNIGSAGG-QWFTPVINHPEVAILGIGRIAEKAIV---RDGEIVAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILM 440          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_BUCAP (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sucB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18
Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = -2
Query:  418 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 861
            N+S     I  +KN+++++AV T  G+  PV+R+AD   ++ I +++++ + K  +N +K ++  GG FT+TN GG FG      IINPPQS IL +   ++R +   G  + K    M + LS DHR+IDG     +L   K  +E+
Sbjct:  241 NASIDKNDIVYYKNIDVSIAVSTPRGVITPVLRNADNMSMADIEKKIKEFSIKGIENKIKIEELIGGNFTITN-GGIFGSLMSTPIINPPQSAILGMHLIKERPMAING--KVKILPMMYLALSYDHRLIDGKESVSFLVTIKNILED 385          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_ACHLA (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Acholeplasma laidlawii GN=pdhC PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.506e-18
Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N    + YI++F  +N+ +AV T +GL VP I++AD+  +  +A +VR LA       +      GGTFT+TN G   GI     +IN P+  IL +G  +++  P +  ++ K +  + ++L+ DHR+IDGA G  +L   K  + NP  +LL
Sbjct:  395 NHDTDEVYIKKF--INLGMAVDTPDGLIVPNIKNADRLSVFELASQVRSLADDTIARKISMDQQTGGTFTITNFGSA-GIAFGTPVINYPELAILGIGKIDRK--PWVVGNEIKIAHTLPLSLAVDHRIIDGADGGRFLMRVKELLTNPTLLLL 543          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_PSEAE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Pseudomonas aeruginosa GN=sucB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV ++ GL VPV+R+A+   L+ I   +    +KAK+  L  +D  GGTFT++N GG FG      I+NPPQ+ IL +   ++R +   G  Q      M + LS DHR+IDG     +L A K  +E+P  +LL
Sbjct:  272 DIGVAVSSDRGLVVPVLRNAEFMSLAEIEGGIANFGKKAKEGKLTIEDMTGGTFTISN-GGVFGSLLSTPIVNPPQTAILGMHKIQERPMAVNG--QVVILPMMYLALSYDHRLIDGKEAVSFLVAIKDLLEDPARLLL 407          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_RALEH (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sucB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I +AV +  GL VP++R+AD+  L+ I +++ +   KA+D  L  ++  GGTF+++N GG FG      IINPPQS IL V + + R  P +   Q        + +S DHR+IDG      L A K  +E+P  +LL
Sbjct:  279 DIGIAVGSPRGLVVPILRNADQMSLADIEKKIAEFGVKARDGKLSLEELTGGTFSISN-GGVFGSMLSTPIINPPQSAILGVHATKDR--PVVEDGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKDALEDPARLLL 414          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_BUCAP (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Buchnera aphidicola subsp. Schizaphis graminum GN=aceF PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17
Identity = 50/127 (39.37%), Postives = 77/127 (60.63%), Query Frame = -2
Query:  445 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWL 825
            K VN+ +AV  +N L+VPV+++ DKK ++ ++ E+  L++KA +N L   D + G FT++NLGG  G   F  IIN P+  IL V  A   + P     ++  S  + ++LS DHRVI+GA  A +L
Sbjct:  264 KYVNVGIAVDVQNALFVPVLKNVDKKNIANLSSELIFLSKKAHENKLDASDMKDGCFTISNLGG-IGGSWFSPIINSPEVAILGVSKA--LIKPLWNGKEFIPSLMLPLSLSYDHRVINGADAARFL 387          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_BUCAI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=aceF PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17
Identity = 47/127 (37.01%), Postives = 76/127 (59.84%), Query Frame = -2
Query:  445 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWL 825
            K +NI  A+   N L+VPV++D +KK +  ++ E+  L++KA+   L  +D  GG FT++NLGG  G   F  IIN P+  IL  G ++ ++ P     ++  S  + ++LS DHRVI+GA  A ++
Sbjct:  258 KYINIGFAIDVNNDLFVPVLKDVNKKNIKQLSSELILLSEKARTRKLNIEDMTGGCFTISNLGG-IGGSWFSPIINSPEVAIL--GISKSQIKPSWNGKEFIPSLMLPLSLSYDHRVINGAYAARFI 381          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_BUCBP (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sucB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17
Identity = 51/154 (33.12%), Postives = 86/154 (55.84%), Query Frame = -2
Query:  400 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N+S  ++ I  +   +I++A+ T  GL  PV+++AD   ++ I  +++  ++K K++ L   D  GG FT+TN GG FG      +INPPQS IL + +  KR  P +  +  +    M + LS DHR+IDG     +L   K ++E+   ++L
Sbjct:  258 NASIDNDEIIYYNYFDISIAISTPRGLVTPVLKNADLMSMAEIEIKIKDFSEKGKNSKLTIDDLIGGNFTITN-GGVFGSLFSTPLINPPQSAILGMHAIHKR--PVIVDENIEVHPMMYLALSYDHRLIDGKESVGFLLKIKEFLEDFSRIVL 408          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_BUCAI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sucB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = -2
Query:  418 FKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 828
            +KN +I++A+ T  GL  PVIR+AD   ++ I ++++  + K   N +  ++  GG FT+TN GG FG      IINPPQ+ IL +   ++R V   G  Q K    M + LS DHR+IDG     +L   K  +E+
Sbjct:  279 YKNFDISIAISTPRGLITPVIRNADTMTMAEIEKKIKDFSIKGLQNKINIKELMGGNFTITN-GGVFGSLMSTPIINPPQTAILGMHVIQERPVVVNG--QIKILPMMYLALSYDHRLIDGKESVGFLINIKNILED 412          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_AZOVI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Azotobacter vinelandii GN=sucB PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17
Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            +I VAV ++ GL VPV+R+A+   L+ I   + +  +KAK   L  ++  GGTFT++N GG FG      I+NPPQ+ IL +   ++R +   G  Q      M + LS DHR+IDG     +L   K  +E+P  +LL
Sbjct:  262 DIGVAVSSDRGLVVPVLRNAEFMSLAEIEGGINEFGKKAKAGKLTIEEMTGGTFTISN-GGVFGSLLSTPIVNPPQTAILGMHKIQERPMAVNG--QVVILPMMYLALSYDHRLIDGKEAVTFLVTMKDLLEDPARLLL 397          
The following BLAST results are available for this feature:
BLAST of DT214601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODP2_BACSU3.450e-1836.43Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_BUCAP3.450e-1835.14Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_ACHLA4.506e-1834.42Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_PSEAE5.885e-1838.85Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RALEH1.311e-1737.41Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_BUCAP2.921e-1739.37Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_BUCAI6.506e-1737.01Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_BUCBP6.506e-1733.12Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BUCAI6.506e-1737.23Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_AZOVI8.498e-1737.41Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006c_G07_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214601 ID=DT214601; Name=DT214601; organism=Citrus sinensis; type=EST; length=862bp
GTTGTTTCACACAACACTGGTAATTGGAAAATCCAAAAAATATATATAAA
TCAAATTATTACCCGCATGAAAGAGGCGATTACACTCTACTAAAATCATG
TTCATCACGTATGTAACCCAAAAATCCATTAAGGAAAGGTCGATAGCAGA
ACACCTTGTTGAACACCCTATCAAGGATGAGTATGAGTTTAAGGATTGGT
TTCATGCCTCGATCCCCTGCTTTTATTCCAAAAATTTTGCATAAAAGTGT
TTACCAATTGAAAAACAAAATCAAGATGTGCTCAGTGACACAACCATGCC
AATCTGATCCCAGGTGGAAGGGGTTGAACTGAAGCCCCCATCTAAACTGA
TACAGCTAGGAAAGAGCTTCTCAACTTAGAAAAAGAAGAGTTTGGCTTAT
AGCAACATGGACTCCGGATTCTCAATGTATCCTTTGAATGCTTTCAACCA
TTCAGCACCAATCGCACCATCTATTACGCGATGATCACAACTTAATGTTA
CCGACATGAAGGAAGAAAATTTGTACTGATCTGGACCCAAGCCAGGGACA
ACCCTTTTCTCAGCAGATCCAACTGCAAGAATGCCAGATTGAGGAGGATT
GATAATGGCACAGAATTGCTTGATGCCGAAGGGTCCTCCCAAATTGGTAA
CTGTGAATGTGCCTCCCTCATAATCTTGTGGTTTCAAGCTGTTGTCTTTG
GCTTTCTGGGCCAACTGTCTGACCTCTTCAGCAATTGTGGATAAGCCTTT
CTTGTCAGCATCCCTTATAACTGGGACATAAAGACCGTTTTCTGTCTGCA
CTGCTACATTAATATTCACATTCTTAAATTGTCGGATATATTCATCAGCC
CATGAACTATTG
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