DT214601

Overview
NameDT214601
Unique NameDT214601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6531 contig Csv1_Contig6531:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_LEIXX (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Leifsonia xyli subsp. xyli GN=pdhC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16
Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = -2
Query:  403 NSSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 861
            NS+W DE I     VN+ +A  T  GL VP +++A    L  +A  + +L   A++   +P D   GT T+TN+ G FG+     I+NP + GI+A+G+ +++  P +   + +     ++  S DHRV+DG + + +L      IE P  +L
Sbjct:  302 NSTWTDEEIIVRHYVNLGIAAATPRGLIVPNVKEAQGMSLLELAGALEELTLTAREGKTQPADMANGTITITNI-GVFGMDTGTPILNPGEVGIVALGTIKQK--PWVVDGEVRPRFVTTLGGSFDHRVVDGDVASRFLADVASIIEEPALLL 451          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_SCHPO (Probable dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC776.15c PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            ++++AV T  GL  PVIR+A+   L  I   +  L  KA+   L  +D   GTFT++N GG FG      IIN PQ+ +L + + ++R V   G  Q      M + L+ DHR++DG     +L+  K YIE+P  MLL
Sbjct:  316 DLSIAVATPKGLVTPVIRNAESMSLLEIESAIATLGSKARAGKLAIEDMASGTFTISN-GGIFGSLYGTPIINLPQTAVLGLHAIKERPVVING--QVVPRPMMYLALTYDHRMVDGREAVTFLRLVKEYIEDPAKMLL 451          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_MYCTU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Mycobacterium tuberculosis GN=sucB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = -2
Query:  421 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKR---VVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIE 816
            ++  AV TE GL  PVI DA    L+ +A  +  +A +A+  +LKP +  GGTFT+TN+G   G      I+ PPQ+ +L  G+  KR   VV   G +     S   + L+ DHR+IDGA    +L   K  +E
Sbjct:  410 HLGFAVDTEQGLLSPVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGGTFTITNIGSQ-GALFDTPILVPPQAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTYDHRLIDGADAGRFLTTIKHRLE 543          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODO2_MYCBO (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Mycobacterium bovis GN=sucB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = -2
Query:  421 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKR---VVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIE 816
            ++  AV TE GL  PVI DA    L+ +A  +  +A +A+  +LKP +  GGTFT+TN+G   G      I+ PPQ+ +L  G+  KR   VV   G +     S   + L+ DHR+IDGA    +L   K  +E
Sbjct:  410 HLGFAVDTEQGLLSPVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGGTFTITNIGSQ-GALFDTPILVPPQAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTYDHRLIDGADAGRFLTTIKHRLE 543          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODB2_PSEAE (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas aeruginosa GN=bkdB PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.093e-15
Identity = 48/148 (32.43%), Postives = 84/148 (56.76%), Query Frame = -2
Query:  400 EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 843
            E + ++  V++ +A Q++NGL VPV+R A+ + L   A EV +LA+ A+    + Q+  G T T+++LG   GI     +IN P+  I+ V    +R  P +          M+++ S DHRV+DG   A +++A +G +E+P ++ L
Sbjct:  283 EVVTRYGAVHVGIATQSDNGLMVPVLRHAESRDLWGNASEVARLAEAARSGKAQRQELSGSTITLSSLGVLGGIVS-TPVINHPEVAIVGVNRIVER--PMVVGGNIVVRKMMNLSSSFDHRVVDGMDAAAFIQAVRGLLEHPATLFL 427          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_PSEAE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Pseudomonas aeruginosa GN=aceF PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.570e-15
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = -2
Query:  400 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 825
            K V+I  AV T +GL VPVIRD D+K L  +A E   LA KA++  L     +G  FT+++L G  G   F  I+N P+  IL V  A  +  P      ++    + ++LS DHRVI+GA  A + K     + +  ++LL
Sbjct:  409 KYVHIGFAVDTPDGLLVPVIRDVDRKSLLQLAAEAADLADKARNKKLSADAMQGACFTISSL-GHIGGTGFTPIVNAPEVAILGVSKATMQ--PVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGELLADIRTLLL 547          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODP2_AZOVI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Azotobacter vinelandii PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = -2
Query:  400 KNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 825
            K V+I  AV T +GL VPVIR+ D+K L  +A E  +LA+KA+   L     +G  FT+++L G  G   F  I+N P+  IL V  A  +  P      ++    + ++LS DHRVI+GA  A + K     + +  ++LL
Sbjct:  500 KYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSL-GHIGGTAFTPIVNAPEVAILGVSKASMQ--PVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL 638          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODB2_PSEPU (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 50/156 (32.05%), Postives = 85/156 (54.49%), Query Frame = -2
Query:  400 NSSWADE--YIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 861
            N+++ DE   I +   V++ +A Q +NGL VPV+R A+   L   A E+ +LA  A++N    ++  G T T+T+LG   GI     ++N P+  I+ V    +R  P +   Q      M+++ S DHRV+DG   A +++A +G +E P  + +
Sbjct:  270 NATYDDEAQIITRHGAVHVGIATQGDNGLMVPVLRHAEAGSLWANAGEISRLANAARNNKASREELSGSTITLTSLGALGGIVS-TPVVNTPEVAIVGVNRMVER--PVVIDGQIVVRKMMNLSSSFDHRVVDGMDAALFIQAVRGLLEQPACLFV 422          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODB2_HUMAN (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DBT PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.039e-14
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGP--DQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A+ TE GL VP +++     +  IA E+ +L +      L   D  GGTFT++N+G   G      +I PP+  I A+GS   + +P      + YK +  M+V+ S DHRVIDGA  + +   +K Y+ENP  MLL
Sbjct:  343 NIGIAMDTEQGLIVPNVKNVQICSIFDIATELNRLQKLGSVGQLSTTDLTGGTFTLSNIGS-IGGTFAKPVIMPPEVAIGALGSI--KAIPRFNQKGEVYK-AQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLL 479          
BLAST of DT214601 vs. ExPASy Swiss-Prot
Match: ODB2_MOUSE (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dbt PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.772e-14
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = -2
Query:  400 NINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 816
            NI +A+ TE GL VP +++   + +  I  E+ +L +      L   D  GGTFT++N+G   G      +I PP+  I A+G+ +         D YK +  M+V+ S DHRVIDGA  + +   +K Y+ENP  MLL
Sbjct:  343 NIGIAMDTELGLIVPNVKNVQVRSVFGIGMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGS-IGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYK-AQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLL 479          
The following BLAST results are available for this feature:
BLAST of DT214601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODP2_LEIXX7.194e-1632.03Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_SCHPO9.395e-1637.41Probable dihydrolipoyllysine-residue succinyltrans... [more]
ODO2_MYCTU9.395e-1637.04Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MYCBO9.395e-1637.04Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODB2_PSEAE2.093e-1532.43Lipoamide acyltransferase component of branched-ch... [more]
ODP2_PSEAE3.570e-1536.62Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_AZOVI7.954e-1535.92Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODB2_PSEPU7.954e-1532.05Lipoamide acyltransferase component of branched-ch... [more]
ODB2_HUMAN1.039e-1436.88Lipoamide acyltransferase component of branched-ch... [more]
ODB2_MOUSE1.772e-1435.97Lipoamide acyltransferase component of branched-ch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006c_G07_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214601 ID=DT214601; Name=DT214601; organism=Citrus sinensis; type=EST; length=862bp
GTTGTTTCACACAACACTGGTAATTGGAAAATCCAAAAAATATATATAAA
TCAAATTATTACCCGCATGAAAGAGGCGATTACACTCTACTAAAATCATG
TTCATCACGTATGTAACCCAAAAATCCATTAAGGAAAGGTCGATAGCAGA
ACACCTTGTTGAACACCCTATCAAGGATGAGTATGAGTTTAAGGATTGGT
TTCATGCCTCGATCCCCTGCTTTTATTCCAAAAATTTTGCATAAAAGTGT
TTACCAATTGAAAAACAAAATCAAGATGTGCTCAGTGACACAACCATGCC
AATCTGATCCCAGGTGGAAGGGGTTGAACTGAAGCCCCCATCTAAACTGA
TACAGCTAGGAAAGAGCTTCTCAACTTAGAAAAAGAAGAGTTTGGCTTAT
AGCAACATGGACTCCGGATTCTCAATGTATCCTTTGAATGCTTTCAACCA
TTCAGCACCAATCGCACCATCTATTACGCGATGATCACAACTTAATGTTA
CCGACATGAAGGAAGAAAATTTGTACTGATCTGGACCCAAGCCAGGGACA
ACCCTTTTCTCAGCAGATCCAACTGCAAGAATGCCAGATTGAGGAGGATT
GATAATGGCACAGAATTGCTTGATGCCGAAGGGTCCTCCCAAATTGGTAA
CTGTGAATGTGCCTCCCTCATAATCTTGTGGTTTCAAGCTGTTGTCTTTG
GCTTTCTGGGCCAACTGTCTGACCTCTTCAGCAATTGTGGATAAGCCTTT
CTTGTCAGCATCCCTTATAACTGGGACATAAAGACCGTTTTCTGTCTGCA
CTGCTACATTAATATTCACATTCTTAAATTGTCGGATATATTCATCAGCC
CATGAACTATTG
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