DT214584

Overview
NameDT214584
Unique NameDT214584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12308 contig Csv1_Contig12308:85..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAES (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.575e-39
Identity = 84/207 (40.58%), Postives = 129/207 (62.32%), Query Frame = -3
Query:   86 PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 706
            PH   ++EI+   L   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ EV+ K   NIGIA  T  GL VP +K+    SI EI+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  227 PHVTLMDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 432          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_STAEQ (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.575e-39
Identity = 84/207 (40.58%), Postives = 129/207 (62.32%), Query Frame = -3
Query:   86 PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 706
            PH   ++EI+   L   +  F+   ++   K TFLP ++K+L  A+ KYP +N+ FNEE+ EV+ K   NIGIA  T  GL VP +K+    SI EI+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  227 PHVTLMDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEVVHKHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 432          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_BACST (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Bacillus stearothermophilus GN=pdhC PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.688e-38
Identity = 82/226 (36.28%), Postives = 140/226 (61.95%), Query Frame = -3
Query:   86 LRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 760
            + G +R + K M  +    PH   ++E +   LV  +  F+   ++  IK TFLP ++K+L  A+ +YP +N+  ++E+ E+I K  +NIGIA  T  GL VP IK+     I  + +E++ L + A+D +L P +  G + T++NIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR++DGAT  K  N  K+L+ +PELLL++
Sbjct:  203 MSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKP-IVRDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLME 427          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_BACSU (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Bacillus subtilis GN=pdhC PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.413e-38
Identity = 79/226 (34.96%), Postives = 142/226 (62.83%), Query Frame = -3
Query:   86 LRGFQRTMVKTM-SMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 760
            + G ++ + K M +     PH   ++E++   LV  +  F+   +D  IK T+LP ++K+L+ A+ K+P +N+  ++++ EVI K   NIGIA  T+ GL VP +KN    S+ EI+ E++ L   A++ +L PA+  G + T++NIG+ GG++  P++N PEVAI+ +GRI +   +  DG +  +P++ +++  DHR++DGAT     N  K+L+ +P+L+L++
Sbjct:  217 MSGIRKAIAKAMVNSKHTAPHVTLMDEVDVTNLVAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKTDEVIQKHYFNIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKAREGKLAPAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAE-KAIVRDGEIVAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILME 441          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODB2_PSEPU (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.112e-33
Identity = 77/232 (33.19%), Postives = 137/232 (59.05%), Query Frame = -3
Query:   86 DDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 778
            D + VP+ G +R + + M  A + + HF YVEEI+  AL  L+    + + D   K T LP L+++L +A+  +P +N+ +++E+  +   G+ ++GIA    +GL VP +++ ++ S+     E+SRL   A++N+ +  + SG TITL+++GA+GG    P++N PEVAI+ + R+ + P +  DG +    +M ++   DHRV+DG   A F    + L+E P  L ++
Sbjct:  193 DSEQVPVIGLRRKIAQRMQDAKRRVAHFSYVEEIDVTALEALRQQLNSKHGDSRGKLTLLPFLVRALVVALRDFPQINATYDDEAQIITRHGAVHVGIATQGDNGLMVPVLRHAEAGSLWANAGEISRLANAARNNKASREELSGSTITLTSLGALGGIVSTPVVNTPEVAIVGVNRMVERP-VVIDGQIVVRKMMNLSSSFDHRVVDGMDAALFIQAVRGLLEQPACLFVE 423          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODB2_PSEAE (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Pseudomonas aeruginosa GN=bkdB PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 78/232 (33.62%), Postives = 134/232 (57.76%), Query Frame = -3
Query:   86 DDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 778
            D++ VP+ G +R + + M  A + IPHF YVEEI+   L  L+A           K T LP L++++ +A+  +P +N+ +++E+  V   G+ ++GIA  + +GL VP +++ +S  +     E++RL + A+  +    + SG TITLS++G +GG    P++N PEVAI+ + RI + P +   GN+    +M ++   DHRV+DG   A F    + L+E+P  L L+
Sbjct:  198 DEQAVPVIGLRRKIAQKMQDAKRRIPHFSYVEEIDVTDLEALRAHLNQKWGGQRGKLTLLPFLVRAMVVALRDFPQLNARYDDEAEVVTRYGAVHVGIATQSDNGLMVPVLRHAESRDLWGNASEVARLAEAARSGKAQRQELSGSTITLSSLGVLGGIVSTPVINHPEVAIVGVNRIVERPMVV-GGNIVVRKMMNLSSSFDHRVVDGMDAAAFIQAVRGLLEHPATLFLE 428          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_ACHLA (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Acholeplasma laidlawii GN=pdhC PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 76/242 (31.40%), Postives = 135/242 (55.79%), Query Frame = -3
Query:   89 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 811
            P   A  K   D + V +   ++ +   M+ +  I P    ++EIN DALV  +   +       IK T++  + K++ +A+ ++P  N+ FN ++ EV +K   N+G+A+ T  GL VPNIKN   LS+ E+  ++  L       +++    +GGT T++N G+ G  FG P++N PE+AI+ +G+I++ P +  +  +  +  + +++  DHR++DGA   +F    K+L+ NP LLLL
Sbjct:  303 PSFAAAGKPQGDVEVVKITRLRKAVSNAMTRSKSIIPETVLMDEINVDALVNFRNEAKGLAESKGIKLTYMAFIAKAVLIALKEFPMFNASFNHDTDEVYIKKFINLGMAVDTPDGLIVPNIKNADRLSVFELASQVRSLADDTIARKISMDQQTGGTFTITNFGSAGIAFGTPVINYPELAILGIGKIDRKPWVVGN-EIKIAHTLPLSLAVDHRIIDGADGGRFLMRVKELLTNPTLLLL 543          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_LEIXX (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Leifsonia xyli subsp. xyli GN=pdhC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.870e-29
Identity = 77/234 (32.91%), Postives = 130/234 (55.56%), Query Frame = -3
Query:   92 YPDDKT--VPLRGFQRTMVKTMSMAA-KIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLL 784
            +PDD+   + ++G ++ +   M  +A   PH     +++    ++     ++      +K + L  + K++  A+ + P +NS + +E  E+I++   N+GIA AT  GL VPN+K  Q +S+LE+   L  L   A++ +  PAD + GTIT++NIG  G   G P+LN  EV I+A+G I++ P +  DG V P  + T+    DHRV+DG   ++F  +   +IE P LLL
Sbjct:  221 WPDDREERILVKGVRKAIANAMVTSAFSAPHVSVFVDVDATRTMEFVKRLKSAPDFVGVKVSPLLIMAKAIVWAVRRNPTVNSTWTDE--EIIVRHYVNLGIAAATPRGLIVPNVKEAQGMSLLELAGALEELTLTAREGKTQPADMANGTITITNIGVFGMDTGTPILNPGEVGIVALGTIKQKPWVV-DGEVRPRFVTTLGGSFDHRVVDGDVASRFLADVASIIEEPALLL 451          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_DICDI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.212e-28
Identity = 66/202 (32.67%), Postives = 120/202 (59.41%), Query Frame = -3
Query:   83 EINCDALVKLKASFQNN-NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQM 685
            E++  AL+ ++ ++++       +K  F+ + +K+ ++A+ + P +N+   E   +++   + NI +A++   GL VP I+N ++LS  +I KE+ RL  LA+++ L   D+ GGT T+SN G  G  FG P++N P+ AI+ M  I+  P +  +G V   PIM + +  DHR++DG     F  + K ++ENPE +LL++
Sbjct:  241 ELDMSALMNMRKTYKDEFEKKHGVKFGFMSAFVKASTIALKEQPIVNASVEEN--DIVYHNNVNINVAVSAPRGLVVPVIRNCENLSFADIEKEIGRLSGLARNDALAIEDSIGGTFTISNGGVFGSMFGTPIINPPQSAILGMHAIKDRPYVV-NGQVVVRPIMYLALTYDHRIIDGREAVTFLKKIKDVLENPERILLEL 439          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_RALEH (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=pdhB PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.093e-27
Identity = 70/207 (33.82%), Postives = 114/207 (55.07%), Query Frame = -3
Query:   89 IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 709
            IPH    +E +   L   +      N    IK T L  +IK+   A+ K+P  N+  + ++L  +LK   NIG A  T +GL VP IK+     +LEI++E+S L +LA+D +L P    GG  ++S++G +GG +  P++N PEVAI+ + +  + P + D     P   + +++  DHRV+DGA  A+F   + QL+ +   +LL
Sbjct:  350 IPHVTNHDEADITELEAFRLQLNKENEKSGIKVTMLAFMIKATVAALKKFPNFNASLDGDNL--VLKKYFNIGFAADTPNGLVVPVIKDADKKGVLEISQEMSELAKLARDGKLKPDQMQGGCFSISSLGGLGGTYFTPIINAPEVAIMGVCKSYQKP-VWDGKQFAPRLTLPLSLSWDHRVIDGAEAARFNTYFGQLLADFRRILL 553          
The following BLAST results are available for this feature:
BLAST of DT214584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
ODP2_STAES7.575e-3940.58Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAEQ7.575e-3940.58Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_BACST1.688e-3836.28Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_BACSU6.413e-3834.96Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODB2_PSEPU8.112e-3333.19Lipoamide acyltransferase component of branched-ch... [more]
ODB2_PSEAE2.360e-3233.62Lipoamide acyltransferase component of branched-ch... [more]
ODP2_ACHLA8.969e-3231.40Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_LEIXX1.870e-2932.91Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_DICDI1.212e-2832.67Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_RALEH5.093e-2733.82Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I06_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0002b_E03_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214584 ID=DT214584; Name=DT214584; organism=Citrus sinensis; type=EST; length=843bp
ACATACAATAATATTATTATTTTGCGTGTAATTGAGAGTTATTGAAAAGT
GTAAGCTGAGGAGCAATGAAGATGCATCATCTCATTTGCAACAGAAGTAA
CTCAGGGTTTTCGATTAACTGTTTCCACTCATTGCAGAACTTTGCGACAG
TTGCTCCATCCAAAACTCTGTGATCAGCACCTATATTAACGGTCATAATT
GGTGAGGGGTACACATTTCCATCGTCTGAAAGACGTGGAACTTTCTCAAT
TCGGCCCATTGCAATGATGGCAACTTCAGGCAAGTTGAGAAGTGGCGCAC
CAAATTTTCCGCCGATTGCTCCAATATTGCTGAGAGTTATTGTTCCACCA
GAATTATCAGCTGGATTAAGCTCGTTATCCTTTGCTAATTGTTGTAACCG
TGACAGTTCCTTTGTTATCTCCAAGATGGAAAGGGACTGAACATTCTTAA
TGTTAGGTACAGCTAGACCATGTTGAGTAGCCATTGCAATTCCAATATTG
TGGGAACCTTTAAGAATGACCTCAAGTGACTCCTCATTGAAGCAACTATT
CATGAAGGGATATTTGCTCATGGCCATCGAAAGTGACTTTATCAATGATG
GAAGGAAAGTATGCTTAATGTTTGGGTCAGAATTATTATTTTGAAAAGAT
GCCTTAAGCTTCACAAGAGCATCACAATTTATCTCTTCTACATAATGAAA
ATGCGGTATTTTTGCAGCCATGGACATTGTTTTGACCATTGTTCTCTGGA
AACCCCTCAAGGGAACTGTCTTATCATCAGGGTACCATTTAACTTCAGCA
AATGTTTGTGGGTAGGTCTCTTCTTCTCCTAAAAGCTGCTCTC
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