DT214584

Overview
NameDT214584
Unique NameDT214584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_MYCPN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Mycoplasma pneumoniae GN=pdhC PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.605e-26
Identity = 66/181 (36.46%), Postives = 109/181 (60.22%), Query Frame = -3
Query:   83 NIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRI-EKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQM 622
            N+K +F    +K++  A+ K+P  N  +++E   ++L    N+GIA+ T  GL VPNIK  Q+ S+++I K++  L   A+  ++   D S GTI+++N G++G  FG P++  PE+ I+A G + E+V R   +G V    I+ + I ADHR +DGA V +F  E  + IE  EL+ L++
Sbjct:  225 NMKISFFAFFVKAIVNALKKFPVFNGRYDKERNLIVLNKDVNVGIAVDTPDGLIVPNIKQAQTKSVVDIAKDIVDLANRARSKQIKLPDLSKGTISVTNFGSLGAAFGTPIIKHPEMCIVATGNMEERVVRA--EGGVAVHTILPLTIAADHRWVDGADVGRFGKEIAKQIE--ELIDLEV 401          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_RICFE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia felis GN=pdhC PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25
Identity = 69/230 (30.00%), Postives = 130/230 (56.52%), Query Frame = -3
Query:   89 KTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNS-DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 772
            + VP    ++ + K +  + + +PHF+   E N D L+ ++     + S D + + +    +I +++ A+ + P  N+ + E+++      + +I +A+A ++GL  P +KN    +I+E+++E+  L + AKDN+L P +  GG  T+SN+G  G K    ++N P+  I+ +G   K   + +D  V  + IM V + ADHRV+DGA  A+F   +K+ IE+P L+L+
Sbjct:  186 RLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDINKSFSEDKSTRISVNDFIILAVAKALQELPNANASWGEDAIRY--HNNVDISVAVAIENGLVTPIVKNANQKNIIELSREMKELIKKAKDNKLTPEEFQGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGASAKRAIVKND-QVTIATIMDVTLSADHRVVDGAVGAEFLAAFKKFIESPALMLI 412          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_MYCCT (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=pdhC PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25
Identity = 68/227 (29.96%), Postives = 126/227 (55.51%), Query Frame = -3
Query:   89 VPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 766
            VP+ G ++  VK M+ +  +I  F  ++  +     K++   +++ +   IK T+L  +IK+++ ++   P +N   +  + ++    + NIGIA+ T +GL VP IK    LS+ EI  ++S L   AKD +L  A+ +  T T+SN G++G  +  P++N PE AI+ +G + + P L  +G +    IM +++  DHR++DGA   +F  + +  +  P LL +
Sbjct:  213 VPMNGVRKATVKAMTKSHTEIAAFTGMKNTDITETHKMRTELKDHAAASGIKLTYLAFIIKAVAKSLRDMPNINVRGDFANNKIQFMHNINIGIAVDTPNGLMVPVIKGADHLSVFEIAIKISELANKAKDGKLTRAEMTEATFTVSNFGSVGLDYATPIINSPESAILGVGTMSQTP-LYINGELQKRFIMPLSMTCDHRIIDGADAGRFLIKVQDYLSKPVLLFM 438          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_BACSU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bacillus subtilis GN=odhB PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25
Identity = 67/221 (30.32%), Postives = 122/221 (55.20%), Query Frame = -3
Query:   86 RTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPN-IKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 745
            + +V+    +A +  F+   E++  A++ L+   ++   + N +K  F+    K++  A+ KYP +N+    +  E+I+K  ++IGIA+A   GL VP +++   L+   I KE+  L + A++N+L  ++  GG+ T++N G  G     P+LN P+V I+ M +I+  P   D+      P+M + +  DHR++DG     F    K L+E+PE LLL+
Sbjct:  201 KRLVEVQQTSAMLTTFN---EVDMTAVMNLRKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNAEIQGD--ELIVKKFYDIGIAVAADEGLVVPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQGGSFTITNGGTFGSLMSTPILNSPQVGILGMHKIQLRPVAIDEERFENRPMMYIALSYDHRIVDGKEAVGFLVTIKNLLEDPEQLLLE 416          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_YEAST (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Saccharomyces cerevisiae GN=KGD2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.795e-25
Identity = 71/243 (29.22%), Postives = 133/243 (54.73%), Query Frame = -3
Query:   89 YPQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNN-SDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 814
            +P+T   VK       + LR  +R + ++ + AA +  F+   E++  AL++++  +++        K  F+    K+ ++A    P +N     E  +++ +   +I +A+AT  GL  P ++N +SLS+L+I  E+ RL   A+D +L   D +GGT T+SN G  G  +G P++N P+ A++ +  +++ P ++ +G +   P+M + +  DHR+LDG     F    K+LIE+P  +LL
Sbjct:  231 FPRTETRVKM----NRMRLRIAER-LKESQNTAASLTTFN---EVDMSALMEMRKLYKDEIIKKTGTKFGFMGLFSKACTLAAKDIPAVNGAI--EGDQIVYRDYTDISVAVATPKGLVTPVVRNAESLSVLDIENEIVRLSHKARDGKLTLEDMTGGTFTISNGGVFGSLYGTPIINSPQTAVLGLHGVKERP-VTVNGQIVSRPMMYLALTYDHRLLDGREAVTFLKTVKELIEDPRKMLL 462          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_MYCGE (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Mycoplasma genitalium GN=pdhC PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.131e-25
Identity = 66/225 (29.33%), Postives = 124/225 (55.11%), Query Frame = -3
Query:  110 DDKTVPLRGFQRTMVKTMSMA-AKIPHFHYVEEINCDALVKLKASFQNNN-SDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIE 778
            + KT+ +   ++ + + M+ + A IP       +N   L + + S      S  ++K ++    +K++  A+ K+P  N+ ++ +  E++L    N+GIA+ T+ GL VPNIK  Q+ S++EI + +  L   A+  ++   D + GTI+++N G++G   G P++  PE+ I+A G +E+     ++G +    I+ + I ADHR +DGA V +F  E  + IE
Sbjct:  153 EQKTIAISTMRKAIAEAMTKSHAIIPTTVLTFYVNATKLKQYRESVNGYALSKYSMKISYFAFFVKAIVNALKKFPVFNASYDPDQNEIVLNDDINVGIAVDTEEGLIVPNIKQAQTKSVVEIAQAIVDLANKARTKKIKLTDLNKGTISVTNFGSLGAAVGTPIIKYPEMCIVATGNLEERIVKVENG-IAVHTILPLTIAADHRWVDGADVGRFGKEIAKQIE 376          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_RICCN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia conorii GN=pdhC PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24
Identity = 69/230 (30.00%), Postives = 129/230 (56.09%), Query Frame = -3
Query:   89 KTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNS-DPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 772
            + VP    ++ + K +  + + +PHF+   E N D L+ ++       S D + + +    +I +++ A+ + P  N+ + E+++      + +I +A+A ++GL  P +KN    +ILE+++E+  L + AKDN+L P +  GG  T+SN+G  G K    ++N P+  I+ +G   K   + +D  +  + IM V + ADHRV+DGA  A+F   +K+ IE+P L+L+
Sbjct:  186 RLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDINKFFSEDKSTRISVNDFIILAVAKALQEVPNANASWGEDAIRYY--NNVDISVAVAIENGLVTPIVKNANQKNILELSREMKALIKKAKDNKLTPEEFQGGGFTISNLGMYGIKNFNAIINPPQSCIMGVGASAKRAIVKND-QITIATIMDVTLSADHRVVDGAVGAEFLVAFKKFIESPVLMLI 412          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_RICTY (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rickettsia typhi GN=pdhC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.387e-24
Identity = 67/230 (29.13%), Postives = 130/230 (56.52%), Query Frame = -3
Query:   89 KTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNSDPNI-KHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 772
            ++VP    ++ + K +  + + +PHF+   E N D L+ ++     + S+  + K +    +I +++ A+ + P  N+ + E+++      + +I +A+A ++G+  P IK+    +I+E++ E+  L + AKDN+L P +  GG  T+SN+G  G K    ++N P+  I+ +G   K   + +D  +  + IM V + ADHRV+DGA  A+F   +K+ IE+P L+L+
Sbjct:  178 RSVPNNNIRQIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDINKSFSEDKLTKISVNDFIILAVAKALQEVPNANASWAEDAIRYY--NNVDISVAVAIENGIVTPIIKDANKKNIIELSHEMKILIKKAKDNKLTPVEFQGGGFTISNLGMYGIKNFNAIINTPQSCIMGVGASTKRAIVKND-QIIIATIMDVTLSADHRVIDGAVSAEFLASFKRFIEHPVLMLI 404          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_ZYMMO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Zymomonas mobilis GN=pdhC PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.366e-24
Identity = 66/243 (27.16%), Postives = 131/243 (53.91%), Query Frame = -3
Query:   86 PQTFAEVKWYPDDKTVPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 811
            P+   ++       ++ L   +R + + ++ + + IPH +   ++  DAL+KL++    + +  NIK +    LIK+ ++A+   P +N  F+ +  +++     +I +A++ + GL  P +K   + S+  ++ E+  L   A++  L P +  GGT ++SN+G  G K    ++N P+ +I+A+G  E+ P + DD  +  + + T+    DHRV+DGA  A F + +K L+E P  +L Q
Sbjct:  201 PEASGKITHDTPHNSIKLSNMRRVIARRLTESKQNIPHIYLTVDVQMDALLKLRSELNESLAVQNIKISVNDMLIKAQALALKATPNVNVAFDGD--QMLQFSQADISVAVSVEGGLITPILKQADTKSLSALSVEMKELIARAREGRLQPQEYQGGTSSISNMGMFGIKQFNAVINPPQASILAIGSGERRPWVIDDA-ITIATVATITGSFDHRVIDGADAAAFMSAFKHLVEKPLGILAQ 440          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_HAEIN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Haemophilus influenzae GN=aceF PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.990e-24
Identity = 62/191 (32.46%), Postives = 109/191 (57.07%), Query Frame = -3
Query:  137 IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKF 709
            + HF   +  + +A  K + + +       +K T +  ++K+++ A+  YP  NS   E++  +ILK   NIG+A+ T +GL VP  KNV    I+E+++EL  + + A++ +L  +D  GG  T+S++G IG    AP++N PEVAI+ + +    P + +     P  I+ +++  DHRV+DGA  A+F
Sbjct:  363 VTHFDKADITDLEAFRKEQNALREKQK-LGVKITPVVFIMKAVAKALEAYPRFNSSITEDAQRLILKKYINIGVAVDTPNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTHFAPIVNAPEVAILGVSKSSMEP-VWNGKEFAPRLILPMSLSFDHRVIDGADGARF 551          
The following BLAST results are available for this feature:
BLAST of DT214584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
ODP2_MYCPN9.605e-2636.46Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICFE2.140e-2530.00Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_MYCCT2.140e-2529.96Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_BACSU2.140e-2530.32Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_YEAST2.795e-2529.22Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_MYCGE8.131e-2529.33Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICCN1.062e-2430.00Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_RICTY1.387e-2429.13Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ZYMMO2.366e-2427.16Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_HAEIN8.990e-2432.46Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I06_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0002b_E03_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214584 ID=DT214584; Name=DT214584; organism=Citrus sinensis; type=EST; length=843bp
ACATACAATAATATTATTATTTTGCGTGTAATTGAGAGTTATTGAAAAGT
GTAAGCTGAGGAGCAATGAAGATGCATCATCTCATTTGCAACAGAAGTAA
CTCAGGGTTTTCGATTAACTGTTTCCACTCATTGCAGAACTTTGCGACAG
TTGCTCCATCCAAAACTCTGTGATCAGCACCTATATTAACGGTCATAATT
GGTGAGGGGTACACATTTCCATCGTCTGAAAGACGTGGAACTTTCTCAAT
TCGGCCCATTGCAATGATGGCAACTTCAGGCAAGTTGAGAAGTGGCGCAC
CAAATTTTCCGCCGATTGCTCCAATATTGCTGAGAGTTATTGTTCCACCA
GAATTATCAGCTGGATTAAGCTCGTTATCCTTTGCTAATTGTTGTAACCG
TGACAGTTCCTTTGTTATCTCCAAGATGGAAAGGGACTGAACATTCTTAA
TGTTAGGTACAGCTAGACCATGTTGAGTAGCCATTGCAATTCCAATATTG
TGGGAACCTTTAAGAATGACCTCAAGTGACTCCTCATTGAAGCAACTATT
CATGAAGGGATATTTGCTCATGGCCATCGAAAGTGACTTTATCAATGATG
GAAGGAAAGTATGCTTAATGTTTGGGTCAGAATTATTATTTTGAAAAGAT
GCCTTAAGCTTCACAAGAGCATCACAATTTATCTCTTCTACATAATGAAA
ATGCGGTATTTTTGCAGCCATGGACATTGTTTTGACCATTGTTCTCTGGA
AACCCCTCAAGGGAACTGTCTTATCATCAGGGTACCATTTAACTTCAGCA
AATGTTTGTGGGTAGGTCTCTTCTTCTCCTAAAAGCTGCTCTC
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