DT214584

Overview
NameDT214584
Unique NameDT214584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12308 contig Csv1_Contig12308:85..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_DICDI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=pdhC PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22
Identity = 65/211 (30.81%), Postives = 117/211 (55.45%), Query Frame = -3
Query:   89 IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMA--TQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSD--DGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 709
            IPH++   E   D L+KL++     N+   +K +    ++K+ + A+   P +NS + ++     ++  HNI I +A  T  GL  P ++ V    +  I+  + +L + A++ +L+P++   GT T+SN+G +G K  A ++N P+ AI+A+G  E    LS+  D     + I++V +  DHRV+DGA  A++   +K  +ENP  L+L
Sbjct:  432 IPHYYLTMECRVDKLLKLRSELNAMNT---VKISVNDFIVKASAAALRDNPVVNSTWTDQ----FIRRYHNIDINVAVNTPQGLFTPIVRGVDMKGLNSISTSVKQLAEKAQNGKLHPSEFESGTFTISNLGMLGIKQFAAVINPPQAAILAVGTTETRVVLSNKPDSPYETATILSVTLSCDHRVIDGAVGAEWLKSFKDYVENPIKLIL 635          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_SCHPO (Probable dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC776.15c PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22
Identity = 65/218 (29.82%), Postives = 118/218 (54.13%), Query Frame = -3
Query:   89 KTMSMAAKIPHFHYVEEINCDALVKLKASFQNNN-SDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESL--EVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 733
            ++ + AA +  F+   E +  A+V L+  +++    +  +K  F+    K+ + AM + P +N     E     ++ +   ++ IA+AT  GL  P I+N +S+S+LEI   ++ L   A+  +L   D + GT T+SN G  G  +G P++NLP+ A++ +  I++ P +  +G V P P+M + +  DHR++DG     F    K+ IE+P  +LL
Sbjct:  238 ESQNRAASLTTFN---ECDMSAVVALRKKYKDEILKETGVKIGFMSFFSKACTQAMKQIPAINGSIEGEGKGDTLVYRDFCDLSIAVATPKGLVTPVIRNAESMSLLEIESAIATLGSKARAGKLAIEDMASGTFTISNGGIFGSLYGTPIINLPQTAVLGLHAIKERP-VVINGQVVPRPMMYLALTYDHRMVDGREAVTFLRLVKEYIEDPAKMLL 451          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: OPD23_ARATH (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.214e-22
Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = -3
Query:   89 IPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLI-KSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGA-IGGKFGAPLLNLPEVAIIAMGRIEK--VPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 709
            IPH++   +   D L+ L++   +       K   +  L+ K+ ++A+ K P  NS + ++ +      + NI +A+ T++GL VP +K+     +  I +E+  L Q AK+N L P D  GGT T+SN+G   G K    ++N P+ AI+A+G  EK  VP    D   + S  M V +  DHRV+DGA  A++   +K  IENP+ +LL
Sbjct:  332 IPHYYLTVDTCVDKLMALRSQLNSFKEASGGKRISVNDLVVKAAALALRKVPQCNSSWTDDYIRQFK--NVNINVAVQTENGLYVPVVKDADRKGLSTIGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQFNFAS-YMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_SCHPO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC794.07 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 64/233 (27.47%), Postives = 125/233 (53.65%), Query Frame = -3
Query:   89 DDKTVPLRGFQRTMVKTMSMAAKI-PHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRI--EKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 778
            D + +PL   ++ +   ++ +  + PH++    +N + +++L+A+  N  +D   K +    +IK+ + A+ + P +N+ +  + +      + +I +A+AT  GL  P I+N  +L + EI+       Q A++N+L P +  GGT T+SN+G         ++N P+  I+A+G      VP  + +     +PIM   + +DHRV+DGA  A+F    K+++ENP  ++L
Sbjct:  254 DYEDLPLSNMRKIIASRLAESKNMNPHYYVTVSVNMEKIIRLRAAL-NAMADGRYKLSVNDLVIKATTAALRQVPEVNAAWMGDFIRQYK--NVDISMAVATPSGLITPVIRNTHALGLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNLGMFPVDQFTAIINPPQACILAVGTTVDTVVPDSTSEKGFKVAPIMKCTLSSDHRVVDGAMAARFTTALKKILENPLEIML 483          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_ECOLI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Escherichia coli (strain K12) GN=aceF PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.777e-22
Identity = 60/196 (30.61%), Postives = 112/196 (57.14%), Query Frame = -3
Query:  137 IPHFHYVEEINCDALVKLKASFQNNNSDP-----NIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKF 709
            IPH  + ++ +   + +L+A  +  N +      ++K T +  ++K+++ A+ + P  NS  +E+   + LK   NIG+A+ T +GL VP  K+V    I+E+++EL  + + A+D +L   +  GG  T+S+IG +G    AP++N PEVAI+ + +    P + +     P  ++ +++  DHRV+DGA  A+F
Sbjct:  423 IPHVTHFDKTD---ITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEP-VWNGKEFVPRLMLPISLSFDHRVIDGADGARF 614          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_RICTY (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi GN=sucB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.442e-22
Identity = 59/202 (29.21%), Postives = 110/202 (54.46%), Query Frame = -3
Query:   83 EINCDALVKLKASFQNN-NSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQM 685
            EI+   ++ L+  ++        +K  F+   +K+   A+   P +N+  + + L  + K  ++IG+A+ T+ GL VP I++   +S  +I + +  L + A++ +L+ +D SGGT ++SN G  G     P++N P+  I+ + + E+   +  DG +   P+M + +  DHR++DG     F  + K LIENPE LLL +
Sbjct:  200 EIDMSKVIALRNQYKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDL--LYKNYYDIGVAVGTEQGLVVPVIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSGGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEE-RAVVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKNLIENPEKLLLNL 398          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_HAEIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Haemophilus influenzae GN=sucB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.099e-21
Identity = 68/259 (26.25%), Postives = 137/259 (52.90%), Query Frame = -3
Query:   83 EQLLGEEETYPQTFAEVKWYP-DDKTVPLRGFQRTMVKTMSMA----AKIPHFHYVEEINCDALVKLKASF-QNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQM 841
            +Q+  E  T   T + V +    +K VP+   ++ + + +  A    A +  F+   E++   ++ L+ ++ +      +++  F+   IK++  A+ +YP +N+  + +  +V+     +I IA++T  GL  P +++   LS+ EI K++  L +  +D +L   D +GG  T++N G  G     P++N P+ AI+ M  I++ P ++ +G V   P+M + +  DHR++DG     F    K+L+E+P  LLL++
Sbjct:  157 QQVKQEAATEQNTISTVAYSARSEKRVPMTRLRKRIAERLLEAKNSTAMLTTFN---EVDMQPIMTLRKTYGEKFEKQHSVRLGFMSFYIKAVVEALKRYPEVNASIDGD--DVVYHNYFDISIAVSTPRGLVTPVLRDCDKLSMAEIEKQIKALAEKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKERP-IALNGQVVIRPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLEI 409          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODP2_RHIME (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Rhizobium meliloti GN=pdhC PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.435e-21
Identity = 69/232 (29.74%), Postives = 125/232 (53.88%), Query Frame = -3
Query:   89 VPLRGFQRTMVKTMSMAAK-IPHFHYVEEINCDALVKLKASFQ----NNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSH-NIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLL 766
            VP  G ++T+ K +  + + IPHF+   +   DAL+ L+A         +  P  K +    +IK+L++A+   P  N  + ++++   +K  H ++G+A++   GL  P ++  +  S+  I+ E+  L + AK+ +L P +  GGT  +SN+G +G K  A ++N P   I+A+G  E    + +   V  + +MTV +  DHR +DGA  A+    +K+ IENP  +L+
Sbjct:  220 VPHDGMRKTIAKRLVESKQTIPHFYVSVDCELDALMALRAQLNAAAPEKDGKPVYKLSVNDMVIKALALALRDVPDANVSWTDQNM---VKHKHADVGVAVSIPGGLITPIVRQAELKSLSAISNEMKDLGKRAKERKLKPEEYQGGTTAVSNMGMMGVKDFAAVVNPPHATILAVGAGEDRVVVRNKEMVIAN-VMTVTLSTDHRCVDGALGAELLAAFKRYIENPMGMLV 447          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_STAES (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.874e-21
Identity = 66/220 (30.00%), Postives = 112/220 (50.91%), Query Frame = -3
Query:   86 RTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 745
            + +++  +  A +  F+ V+  N   L K K      + D   K  F+    K+   A+ KYP +N+  + +  ++I K  ++IGIA++T  GL VP +++    +  EI +E++ L   A+D +L   D   G+ T++N G  G     P++N  + AI+ M  I   P   D   +   P+M + +  DHR++DG     F    K+LIENPE LLL+
Sbjct:  203 KKLLEVSNQTAMLTTFNEVDMTNVMDLRKRKKEQFIKDHD-GTKLGFMSFFTKAAVAALKKYPEVNAEIDGD--DMITKQFYDIGIAVSTDDGLLVPFVRDCDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAVDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLLE 419          
BLAST of DT214584 vs. ExPASy Swiss-Prot
Match: ODO2_STAEQ (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.874e-21
Identity = 66/220 (30.00%), Postives = 112/220 (50.91%), Query Frame = -3
Query:   86 RTMVKTMSMAAKIPHFHYVEEINCDALVKLKASFQNNNSDPNIKHTFLPSLIKSLSMAMSKYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 745
            + +++  +  A +  F+ V+  N   L K K      + D   K  F+    K+   A+ KYP +N+  + +  ++I K  ++IGIA++T  GL VP +++    +  EI +E++ L   A+D +L   D   G+ T++N G  G     P++N  + AI+ M  I   P   D   +   P+M + +  DHR++DG     F    K+LIENPE LLL+
Sbjct:  203 KKLLEVSNQTAMLTTFNEVDMTNVMDLRKRKKEQFIKDHD-GTKLGFMSFFTKAAVAALKKYPEVNAEIDGD--DMITKQFYDIGIAVSTDDGLLVPFVRDCDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAVDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLLE 419          
The following BLAST results are available for this feature:
BLAST of DT214584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
ODP2_DICDI1.695e-2230.81Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_SCHPO1.695e-2229.82Probable dihydrolipoyllysine-residue succinyltrans... [more]
OPD23_ARATH2.214e-2233.65Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_SCHPO2.892e-2227.47Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ECOLI3.777e-2230.61Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_RICTY6.442e-2229.21Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_HAEIN1.099e-2126.25Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODP2_RHIME1.435e-2129.74Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODO2_STAES1.874e-2130.00Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAEQ1.874e-2130.00Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02I06_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0002b_E03_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214584 ID=DT214584; Name=DT214584; organism=Citrus sinensis; type=EST; length=843bp
ACATACAATAATATTATTATTTTGCGTGTAATTGAGAGTTATTGAAAAGT
GTAAGCTGAGGAGCAATGAAGATGCATCATCTCATTTGCAACAGAAGTAA
CTCAGGGTTTTCGATTAACTGTTTCCACTCATTGCAGAACTTTGCGACAG
TTGCTCCATCCAAAACTCTGTGATCAGCACCTATATTAACGGTCATAATT
GGTGAGGGGTACACATTTCCATCGTCTGAAAGACGTGGAACTTTCTCAAT
TCGGCCCATTGCAATGATGGCAACTTCAGGCAAGTTGAGAAGTGGCGCAC
CAAATTTTCCGCCGATTGCTCCAATATTGCTGAGAGTTATTGTTCCACCA
GAATTATCAGCTGGATTAAGCTCGTTATCCTTTGCTAATTGTTGTAACCG
TGACAGTTCCTTTGTTATCTCCAAGATGGAAAGGGACTGAACATTCTTAA
TGTTAGGTACAGCTAGACCATGTTGAGTAGCCATTGCAATTCCAATATTG
TGGGAACCTTTAAGAATGACCTCAAGTGACTCCTCATTGAAGCAACTATT
CATGAAGGGATATTTGCTCATGGCCATCGAAAGTGACTTTATCAATGATG
GAAGGAAAGTATGCTTAATGTTTGGGTCAGAATTATTATTTTGAAAAGAT
GCCTTAAGCTTCACAAGAGCATCACAATTTATCTCTTCTACATAATGAAA
ATGCGGTATTTTTGCAGCCATGGACATTGTTTTGACCATTGTTCTCTGGA
AACCCCTCAAGGGAACTGTCTTATCATCAGGGTACCATTTAACTTCAGCA
AATGTTTGTGGGTAGGTCTCTTCTTCTCCTAAAAGCTGCTCTC
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