DT214580

Overview
NameDT214580
Unique NameDT214580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DT214580_ssr648 microsatellite DT214580_ssr648:648..659. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10386 contig Csv1_Contig10386:23..865. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANK2_HUMAN (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.628e-12
Identity = 64/213 (30.05%), Postives = 93/213 (43.66%), Query Frame = -3
Query:  242 KMAVPRNGMMEEDDSEEDNALFEEDGVNMDLESE------TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLIN------------------SASG--TECVKRML------ETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 784
            K+ +P   +    D  +  AL  ++  N D++S+      T      L  AA  G+V+   L L N   ++D    +  T LH+    G    V+LLL+RG  ++AK  DG  PLH A   G  ++V+LL+                   +A G   ECVK +L      + V  +  T LH AA   H  V +LLL   A+P    L G TP
Sbjct:  190 KVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIAAHYGNVNVATLLL-NRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALNGFTP 401          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANK1_HUMAN (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12
Identity = 51/165 (30.91%), Postives = 74/165 (44.85%), Query Frame = -3
Query:  200 LESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPDTEARRIL 694
            L   TP H+     A +   V  + L L     SID   E   T LH+    G+LP V+ LL+RGAS    +     PLH A   G  E+ + L+ +       K  +     +  TPLH AAR  H ++++LLL + A+P  A   G TP  +   +     +L
Sbjct:  369 LNGFTPLHI-----ACKKNHVRVMELLLKT-GASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN-------KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVL 520          

HSP 2 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 52/181 (28.73%), Postives = 89/181 (49.17%), Query Frame = -3
Query:  242 KMAVPRNGMMEEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 784
            K+ +P   +   +D     A+  ++  N D+ S+T      L  AA   +++  +L L N   S++   ++  T LH+    G +  V+LLL+RGA +E K +D   PLH A   G + I ++L++  +        ++     G +P+H AA+G+H+D +RLLL   A      L   TP
Sbjct:  171 KVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG--FTPLHIAAHYENLNVAQLLL-NRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHGA-------PIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTP 341          

HSP 3 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 44/151 (29.14%), Postives = 78/151 (51.66%), Query Frame = -3
Query:  242 LESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 694
            ++++T   L  +  AAQ   +  +RL L      ID+   D  T LH+    G+    ++LL++GA   ++  +G  PLH AC    + +++LL+ + +        ++ V   G TPLH A+   H+ +++ LL  GASP  +N+  +TP
Sbjct:  298 IQAKTKNGLSPIHMAAQGDHLDCVRLLLQ-YDAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGAS-------IDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETP 440          

HSP 4 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = -3
Query:  242 LESETPPHLRDLAAAAQLGDVHSLRLALDN-LSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 694
            ++  TP HL     AAQ G    + L L    +G++    +   T LHL    G++P   +L++ G  ++A    G  PLH A   G I++V+ L+   +      ++       G +PLH AA+  H D++ LLL +GASP + +  G TP
Sbjct:  633 VQGVTPLHL-----AAQEGHAEMVALLLSKQANGNLGN--KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL-------GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTP 770          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ASB10_MOUSE (Ankyrin repeat and SOCS box protein 10 OS=Mus musculus GN=Asb10 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 54/150 (36.00%), Postives = 69/150 (46.00%), Query Frame = -3
Query:  242 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 691
            E  TP H+     AA  G    L L L   +     P     TALH  C  G+  CV++LL  GA     D+DG  PLH     G +E V+LL+   +  +         + E +TPLH AAR  HV++  LLL  GA P   N  G TP
Sbjct:  115 ELTTPLHV-----AASRGHTEVLELLLRRRAKPDSAP--GGRTALHEACSAGHAACVRVLLVAGADPNTLDQDGKRPLHLCRGPGILECVELLLKFGAQVD------GRTEDEEETPLHIAARLGHVELADLLLRWGACPDVRNSEGWTP 251          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANR27_PONAB (Ankyrin repeat domain-containing protein 27 OS=Pongo abelii GN=ANKRD27 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = -3
Query:  185 DRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPDTEARRILEVAAS 574
            D+   LHL C  G+   V+ LL+  A    KD  G  PL  AC+GG  E+V LL+   +        + T + +G+T LH A   +HV V+ LLL  GAS    N   +T  +  E +++   +L+V  S
Sbjct:  776 DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHEVVALLLQHGAA-------INTSNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPS 898          

HSP 2 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = -3
Query:  245 RLALDNLSG-SIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKT 622
            RLA    SG  ++   +D  + L++  L+G    + LLL+ GA+  A++ D A+PLH AC  G  ++V+ L++S +            D  G+TPL +A  G H +V+ LLL  GA+   +N  G T
Sbjct:  726 RLAKVPASGLGVNVTSQDGSSPLYVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-------NKKDLSGNTPLIYACSGGHHEVVALLLQHGAAINTSNNKGNT 845          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANR11_HUMAN (Ankyrin repeat domain-containing protein 11 OS=Homo sapiens GN=ANKRD11 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11
Identity = 50/172 (29.07%), Postives = 83/172 (48.26%), Query Frame = -3
Query:  200 EDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPDTEARRIL 715
            E+  N  +++ TP H    +   Q G  +S     D     +++  E  +T LH   + G    ++ L+  GA +  KD  G   LH+AC  G+ ++ + L+  A+G E     + T   + DTPLH AA   H  V++LLL  G +P ++N  G+TP ++    T    +L
Sbjct:  126 EESANSPVDT-TPKHPSQ-STVCQKGTPNSASKTKDK----VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLL--AAGAE-----VNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVANSPTMVNLLL 284          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: ANR27_HUMAN (Ankyrin repeat domain-containing protein 27 OS=Homo sapiens GN=ANKRD27 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = -3
Query:  245 RLALDNLSG-SIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKT 622
            RLA    SG  ++   +D  + LH+  L+G    + LLL+ GA+  A++ D A+PLH AC  G  ++V+ L++S +            D  G+TPL +A  G H +++ LLL  GAS   +N  G T
Sbjct:  726 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-------NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNT 845          

HSP 2 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 43/130 (33.08%), Postives = 64/130 (49.23%), Query Frame = -3
Query:  185 DRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEPDTEARRILEVAAS 574
            D+   LHL C  G+   V+ LL+  A    KD  G  PL  AC+GG  E+V LL+   +        +   + +G+T LH A   +HV V+ LLL  GAS    N   +T  +  E +++   +L+V  S
Sbjct:  776 DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS-------INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPS 898          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: IKBL2_HUMAN (NF-kappa-B inhibitor-like protein 2 OS=Homo sapiens GN=NFKBIL2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.297e-11
Identity = 64/209 (30.62%), Postives = 90/209 (43.06%), Query Frame = -3
Query:  179 EEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDR-DTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSELPEP---------DTEARR-------ILEVAASGQ 754
            EE+++EE  A  E + +       +           QL +   L+  L    GS      D  +T LH  C+ G L  VQ L+ +G  L  +D  G  PLH+AC  G +EIV+ L++  +  +           EG TPLH A    H +V  LLL  GAS T     G +P E  +          D E R+       +L+ AASGQ
Sbjct:  467 EEEEAEEAAATAESEALEAGEVELSEGEDDTDGLTPQLEEDEELQGHLGRRKGSKWNRRNDMGETLLHRACIEGQLRRVQDLVRQGHPLNPRDYCGWTPLHEACNYGHLEIVRFLLDHGAAVDDPGGQ----GCEGITPLHDALNCGHFEVAELLLERGASVTLRTRKGLSPLETLQQWVKLYRRDLDLETRQKARAMEMLLQAAASGQ 671          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: IKBL2_DANRE (NF-kappa-B inhibitor-like protein 2 OS=Danio rerio GN=nfkbil2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11
Identity = 63/197 (31.98%), Postives = 84/197 (42.64%), Query Frame = -3
Query:  242 RNGMMEEDDSEED-NALFEEDGVNMDL-ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDR-------------DTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLL------INSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 769
            R G  + DD+E     L E DG+++D  E E      D +   +  D+       ++L G  D+ V  R             +T LH  C+ G L  VQ L+E+G  +  +D  G  PLH++C  G  EIV  L      +N   G EC           G TPLH      H  V RLL+  GAS T  N  G TP
Sbjct:  443 RCGSSQCDDTEARLMELCERDGLSLDQSEDEDEEDEVDNSEPLEDSDIQYSESDDEDLEG-YDKMVTGRRKTQRWNRRNEKGETVLHRACIEGNLKQVQYLIEQGHPVNVRDYCGWTPLHESCNYGHQEIVAFLLDRGANVNDPGGREC----------GGITPLHDTLSCGHFSVARLLVLRGASVTVRNSKGHTP 628          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: CSKI1_RAT (Caskin-1 OS=Rattus norvegicus GN=Caskin1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = -3
Query:  281 LRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVK-RMLETVDAEGDTPLHHAARGEHVDVIRLLLASG 670
            +R L  AA  G    ++L L     +++ P ++    LHL   +G+    ++LL+  ++    D  G  PL  AC  G + +VQLL++S      ++ R  +T D  G +PLH AA+  H+D+IRLLL +G
Sbjct:   83 MRPLHYAAWQGRKEPMKLVL-KAGSAVNVPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCIVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAG 212          
BLAST of DT214580 vs. ExPASy Swiss-Prot
Match: CSKI1_MOUSE (Caskin-1 OS=Mus musculus GN=Caskin1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = -3
Query:  281 LRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVK-RMLETVDAEGDTPLHHAARGEHVDVIRLLLASG 670
            +R L  AA  G    ++L L     +++ P ++    LHL   +G+    ++LL+  ++    D  G  PL  AC  G + +VQLL++S      ++ R  +T D  G +PLH AA+  H+D+IRLLL +G
Sbjct:   83 MRPLHYAAWQGRKEPMKLVL-KAGSAVNVPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAG 212          
The following BLAST results are available for this feature:
BLAST of DT214580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ANK2_HUMAN4.628e-1230.05Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=3[more]
ANK1_HUMAN7.894e-1230.91Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3[more]
ASB10_MOUSE1.031e-1136.00Ankyrin repeat and SOCS box protein 10 OS=Mus musc... [more]
ANR27_PONAB1.031e-1133.85Ankyrin repeat domain-containing protein 27 OS=Pon... [more]
ANR11_HUMAN1.031e-1129.07Ankyrin repeat domain-containing protein 11 OS=Hom... [more]
ANR27_HUMAN1.759e-1134.65Ankyrin repeat domain-containing protein 27 OS=Hom... [more]
IKBL2_HUMAN2.297e-1130.62NF-kappa-B inhibitor-like protein 2 OS=Homo sapien... [more]
IKBL2_DANRE3.918e-1131.98NF-kappa-B inhibitor-like protein 2 OS=Danio rerio... [more]
CSKI1_RAT5.117e-1132.82Caskin-1 OS=Rattus norvegicus GN=Caskin1 PE=1 SV=1[more]
CSKI1_MOUSE5.117e-1132.82Caskin-1 OS=Mus musculus GN=Caskin1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I15_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0001a_E08_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214580 ID=DT214580; Name=DT214580; organism=Citrus sinensis; type=EST; length=843bp
CTCATCAAGATGTATGGCCCCCTATCTCATTTAGGGTTCTGAAATCAATA
GATAACAAAGTTTTAATCGAATTCCAAACATACCTATCTATGAAAAAAAA
AAAAAAGTAACGAGAGCAGTCAAAACAGAAATAAAGTTCACATAATATCA
GCTATTTCGATAGAGATTACTGGCAGGTCTGACCACTAGCAGCAACTTCT
AGAATTCTCCTAGCCTCGGTGTCTGGCTCGGGTAACTCACTTGGGGTCTT
TCCATAGAGGTTTGCCTTTGTAGGAGAAGCACCAGAAGCCAGCAACAATC
TTATGACATCCACGTGTTCACCTCTTGCCGCATGATGAAGAGGAGTATCA
CCTTCAGCATCAACAGTTTCTAACATCCTTTTTACACATTCAGTGCCGCT
AGCACTATTAATTAGAAGTTGAACTATCTCAATAAACCCCCCAGCACAAG
CATCATGCAGAGGAATTGCTCCATCTTCATCCTTGGCCTCCAAACTAGCC
CCTCGTTCCAAGAGTAGCTGAACACAAGGCAGATAGCCATAGAGGCATGT
CAGATGGAGAGCAGTGTCCCTGTCTTCTACTGGTTCATCAATACTACCAC
TCAAGTTATCTAGAGCGAGACGGAGGGAATGAACGTCGCCGAGCTGAGCG
GCGGCGGCGAGGTCACGGAGGTGAGGTGGAGTTTCCGATTCGAGGTCCAT
ATTAACGCCGTCTTCTTCAAAGAGAGCGTTATCTTCTTCGCTATCATCTT
CCTCCATCATTCCGTTGCGCGGTACCGCCATTTTTTCTCCTAATTAACTT
TTTTATAACGGTGTTTTGCAGAGAAAAGTAGAATGAAAACCCT
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