DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 62/193 (32.12%), Postives = 88/193 (45.60%), Query Frame = -1
Query:  117 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI-----FHPIMGGG-VTVPSAGY-GEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGAL 674
            F G  + I N    G   L+  A + GLA+ +VI + G+ISG H NPAV++A   +       +  Y  +Q++  +  A   K +     F    G   VTV   G    A   E I++  L              G LA  ++G  V ++IL  GP +GG MNP R  GPAV  N++   WIY   P+L  L
Sbjct:   50 FIGCLSVIENGTDTG---LLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANHWNFHWIYWLGPLLAGL 239          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 66/208 (31.73%), Postives = 94/208 (45.19%), Query Frame = -1
Query:   90 FAGTATAIVNQKTQ--GSETLIGLAGST---GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYG--EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAV 674
            FAG+ + +   K    G+ T  GL  ++    LA+ V +    +ISG H+NPAVT       +       VY  AQ++ S+ A   LK     I  GG  +     SAG G   A  LE +++F L++              G +A IA+G  V  NIL  G   G SMNP  + GPAV    ++  W+Y   P+ GA   A  Y  +
Sbjct:   35 FAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLK-----IATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 60/211 (28.44%), Postives = 92/211 (43.60%), Query Frame = -1
Query:   90 TATAIVNQKTQGSETLIGLAGSTGLA------VMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAV 665
            T   ++  K Q S    G  G+ G+A      + +++  T  ISG H+NPAVT      +        +YI AQ +  +     +KGI    +   GGG  + ++GY  G A   E I +F L++             +     LA + +G  V +  L   P TG  +NP R++G AV  N  KA    WI+   P +GAL  A  +  +
Sbjct:   54 TVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYI 264          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 57/197 (28.93%), Postives = 85/197 (43.15%), Query Frame = -1
Query:   72 TQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS------AGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED 638
            T G    + LA + GLAV V +    ++SG H+NPAVT               +Y  AQ++ ++ A   L+     +  GG   P        G G A  LE +++F  ++              G +A +AVG  +  N+L  GP  G  MNP R  GPA+    ++  W+Y   P LGA      Y  + +P  D
Sbjct:   63 TAGGLVAVALAHALGLAVAVAVAV--NVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLR-----LATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLLIPPAD 252          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 56/189 (29.63%), Postives = 86/189 (45.50%), Query Frame = -1
Query:   81 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG---------GVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 620
            ++ +A + GLA+  ++ + GHISGAH+NPAVT  F             Y+ AQ++ ++  A  L  +  P + G         GV+V  A   E F     + F L             +G +A +AVG ++ L  L     TG  MNP R+  PA+   N+   W+Y   PI+G   G+  Y  +  P
Sbjct:   41 VLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVXQATTVEIF---LTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDFLLFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP10_HUMAN (Aquaporin-10 OS=Homo sapiens GN=AQP10 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 63/223 (28.25%), Postives = 102/223 (45.74%), Query Frame = -1
Query:   99 ATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM----GGGVTV---------------PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAG---IAVGATVMLNILIAGPSTGGSMNPVRTLGPAV-------------AVNNYKAIWIYLTAPILGALCGAGTY 662
            A A+ + +T+G+   + LAGS  LAV + I   G++SGAHLNPA ++A   +   PW  +P+YI  Q++++ CA+ A   ++H  +    GG +TV               P       F L+ ++   ++             G  AG   + VG  ++   L  G + G  +NP R LGP +             A N +   W+ + AP++GA  G  TY
Sbjct:   43 AQAVTSGETKGNFFTMFLAGS--LAVTIAIYVGGNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKETASIFATYPAPYLSLNNGF-LDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILALGLSMGANCGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGW--WWVPVVAPLVGATVGTATY 260          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = -1
Query:  123 FAGTATAIVNQKTQGSETLIG--LAGSTGLAVMVVILSTG--HISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYG--EAFALEFIISFNLMFXXXXXXXXXXXVGELAG-IAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            F G   A+ +  T    T  G   A + G A++V +++T   HISG H+NPAVT++ A   H       +YI AQ++AS  A F L+      + GG+  P    + G G  +    E + +F+L+F           +   AG +  G  V  N +     +G SMNP R+ GPAVA   +   W+Y   P+ G
Sbjct:   33 FIGVGAAMTDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRW-----LTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAG 222          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 54/201 (26.87%), Postives = 90/201 (44.78%), Query Frame = -1
Query:   57 TQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGE------AFALEFIISFNLMFXXXXXXXXXXXVG-ELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALA 638
            T G   ++ +A +  LA  V +  + + SG H+NPAVT      +   +    +Y  AQ++ ++ A   L+     +  GG+       G       A  LE +++F L++            G ++A +A+G     NIL  GP  G +MNP R  GPA+   N++  W+Y   P++GA      Y  V   + +  A A
Sbjct:   61 TLGGLLVVAVAHALALAAAVAV--SRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLR-----LASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQPEPPAAA 254          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15
Identity = 61/192 (31.77%), Postives = 94/192 (48.96%), Query Frame = -1
Query:  123 FAGTATAIVNQK--TQGSETLIGLAGST---GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASL-CAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG+ + I   K    G+ T  GL  ++     A+ V +    +ISG H+NPAV  AF        + + VYI AQ++ S+ C+A  +      +   G++    G G A  LE +++F L++              G +A IA+G  V  NIL+ G  TG SMNP  + GPAV   ++   W+Y   P++G
Sbjct:   35 FAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVFGAFVGGNITLLRGI-VYIIAQLLGSIVCSALLVFVTASSVPAFGLS-EGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIG 224          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 59/200 (29.50%), Postives = 90/200 (45.00%), Query Frame = -1
Query:   72 NQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYGE--AFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED 647
            +  T G    + LA +  LAV V +    +ISG H+NPAVT               +Y  AQ++ ++ A   L+     +  GG+  P    ++G G+  A  LE +++F LM+              G +A +AVG  +  N+L  GP  G  MNP R  GPA+    ++  W+Y   P LGA      Y  + +P  D
Sbjct:   55 DMSTAGGLVAVALAHALALAVAVAVAV--NISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLR-----LATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLVIPSAD 247          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQP8_HUMAN1.943e-1532.12Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
TIP12_MAIZE2.537e-1531.73Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
PIP26_ORYSJ2.537e-1528.44Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
TIP32_MAIZE3.314e-1528.93Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
MIP_CAVPO3.314e-1529.63Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQP10_HUMAN3.314e-1528.25Aquaporin-10 OS=Homo sapiens GN=AQP10 PE=2 SV=2[more]
TIP43_MAIZE4.328e-1531.28Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP32_ORYSJ4.328e-1526.87Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP1_MEDSA4.328e-1531.77Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_MAIZE5.652e-1529.50Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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