DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 62/211 (29.38%), Postives = 93/211 (44.08%), Query Frame = -1
Query:   90 FAGTATAIVNQKTQG---SETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAV 674
            +   AT I ++K  G      L+G+A + G  + V++  T  ISG H+NPAVT      +         Y+ AQ + ++C    +K      +  +GGG    + GY  G A   E I +F L++             +     LA + +G  V +  L   P TG  +NP R+ G AV  NN KA    WI+   P LGAL  A  +  +
Sbjct:   52 YVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYI 262          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 65/215 (30.23%), Postives = 96/215 (44.65%), Query Frame = -1
Query:   30 GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATK-GSFR 632
            G   ++G+A + G  + +++  T  ISG H+NPAVT      +        +YI AQ + ++C    +KG    ++   GGG    S GY  G   A E I +F L++             +     LA + +G  V +  L   P TG  +NP R+LG AV  N  KA    WI+   P++GA   A  +  V         L   ATK GS+R
Sbjct:   80 GGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYV---------LRASATKLGSYR 285          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 63/214 (29.44%), Postives = 94/214 (43.93%), Query Frame = -1
Query:   30 GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSFR 632
            G   ++G+A + G  + V++  T  ISG H+NPAVT+     +        +YI AQ + ++C    +K     ++   GGG    + GY  G     E I +F L++             +     LA + +G  V +  L   P TG  +NP R+ G AV  NN KA    WI+   P++GA   A  Y    L      AL    + GSFR
Sbjct:   76 GGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGA-AAAAFYHQFILRAAAIKALGSFGSFGSFR 288          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 65/215 (30.23%), Postives = 96/215 (44.65%), Query Frame = -1
Query:   30 GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATK-GSFR 632
            G   ++G+A + G  + +++  T  ISG H+NPAVT      +        +YI AQ + ++C    +KG    ++   GGG    S GY  G   A E I +F L++             +     LA + +G  V +  L   P TG  +NP R+LG AV  N  KA    WI+   P++GA   A  +  V         L   ATK GS+R
Sbjct:   81 GGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYV---------LRASATKLGSYR 286          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 59/193 (30.57%), Postives = 91/193 (47.15%), Query Frame = -1
Query:   90 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGV------TVPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTYSAV 614
            G+A + GL V+ +  + GHISG HLNPAV+I   A   FP   +  YI AQ++ ++ A      + + I  GG          S GY E          A   E +++   +             G  A +A+G  + L  LI+ P T  S+NP R+ G A+ V  +  + +W++  API+GA+ GA  Y  +
Sbjct:   37 GVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAG----AVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG-FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 56/188 (29.79%), Postives = 92/188 (48.94%), Query Frame = -1
Query:   81 TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAG----YGEAFALEFIISFN--LMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYK-AIWIYLTAPILGALCGAGTYSAVKLP 623
            T++ +A + GLA+  +  + G +SG H+NPA+T+A              Y+ AQ++ ++  A  L G+      G + V +       G+A  +E I++F   L             VG  A +++G +V L  L+    TG SMNP R+ GPAV +N +  A W++   PI+GA+  A  Y  +  P
Sbjct:   41 TILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 227          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 65/234 (27.78%), Postives = 98/234 (41.88%), Query Frame = -1
Query:    9 TATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGG------VTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV---------GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSFRR*LINTV 665
            +A  +   +T  + +L+  A +    +   +     +SG H+NPAVT A+A   H        Y  +Q++ S  A   L    H I  G       + V   G+G A  LE +++F +++                       L  + VGA     +L AG  TG SMNP R+ GPAV   +Y    +Y   P++GA   A  + A+  P     A A PAT  S R   + TV
Sbjct:   40 SARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVL----HYISAGQAVPTTRIAVEMTGFG-AGILEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQALVFPTVPEPAPA-PATNESARHGSVQTV 267          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 63/194 (32.47%), Postives = 90/194 (46.39%), Query Frame = -1
Query:   90 IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAA------------FALKGIFHPIMGGGVTVPS-AGYG--EAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAI---WIYLTAPILGALCGAGTYSAV 617
            +G+A + GL V     + GHISG H NPAV+      K FP   +  YIGAQ++ ++ A+            F+L G  +P+   G    S  GYG   A  +EF+++F  +             G  A  A+G  + L  LI+ P T  S+NP R+ G A+   N   I   W++  API GAL     Y  V
Sbjct:   44 LGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDG-SNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG-FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNV 235          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 61/211 (28.91%), Postives = 96/211 (45.50%), Query Frame = -1
Query:   63 GTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG----EAFALEFIISFNL-MFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAV-AVNNYKAIWIYLTAPILGALCGAGTYSAV---KLPEEDTDA 668
            GT +    Q ++G + ++ +A + G  +  ++   GH+SG H+NPAVT       H        YI  Q + ++  +  LK I      G + + S   G      F +E  I+F L +            +G  A +AVG  +    L A   TG SMNP R+ GPAV   +N+   W+Y   PI+G +    TY A+   + PEE+  +
Sbjct:   43 GTGSCTGVQISEG-DVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAVNGDDNWANHWVYWAGPIVGGVVAGITYRALFRARKPEEEASS 252          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 60/194 (30.93%), Postives = 92/194 (47.42%), Query Frame = -1
Query:   90 IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG------GVTVPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTYSAV 617
            +G+A + GL+V+ +  + G ISGAHLNPAV++       FP   +  Y+ AQ++  L A     G+ + I  G           S GYGE          A   E +++   +             G  A IA+G T+ L  LI+ P T  S+NP R+   A+ V ++    +W++  APILGA+ GA  Y  +
Sbjct:   36 LGVALAFGLSVLTMAYAIGPISGAHLNPAVSVGLWVGGRFPASQLLPYVVAQVLGGLAAG----GVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGATSKRAPQG-FAPIAIGLTLTLIHLISIPVTNTSVNPARSTAVALYVGDWAVSQLWLFWVAPILGAVLGALAYRLI 224          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PIP27_ARATH5.652e-1529.38Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP24_MAIZE5.652e-1530.23Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP24_ARATH5.652e-1529.44Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP23_MAIZE5.652e-1530.23Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
AQPZ_CHRVO7.382e-1530.57Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQP5_HUMAN7.382e-1529.79Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP51_ORYSJ9.642e-1527.78Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQPZ_SYNY39.642e-1532.47Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQP_CICVR1.259e-1428.91Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQPZ_PSEAE1.259e-1430.93Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
back to top