DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 56/192 (29.17%), Postives = 88/192 (45.83%), Query Frame = -1
Query:   99 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG------GVTVPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTY 620
            L+G++ + GL V+ +  + GHISG HLNPAV+    A   FP   +  YI AQ+   +  A    G+ + I  G           S G+GE              E +++   +             G  A IA+G  + L  LI+ P +  S+NP R+ GPA+ V ++    +W++  API+GA+     Y
Sbjct:   36 LLGVSLAFGLTVLTMAFAIGHISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGA----GVLYLIASGQEGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKG-FAPIAIGLCLTLIHLISIPISNTSVNPARSTGPALFVGDWAVSQLWLFWAAPIIGAILAGVIY 222          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 57/193 (29.53%), Postives = 86/193 (44.56%), Query Frame = -1
Query:  117 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI-----FHPIMGGGVTV--PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGAL 674
            F G  + I N    G   L+  A + GLA+ ++I + G+ISG H NPAV++A   +       +  Y  +QI   L  A   K +     F    G    +        EA  +E I++  L+            +G LA  ++G +V+++IL  G  +G  MNP R  GPAV    +   WIY   P+L  L
Sbjct:   50 FIGCLSVIENSPDTG---LLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAGYWDFHWIYWLGPLLAGL 239          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 53/182 (29.12%), Postives = 82/182 (45.05%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 614
            G+A + G  +  ++  T  ISG H+NPAVT      +         Y+  Q + ++C A  +KG     +  +GGG  V + GY  G+    E I +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N+  A    WI+   P++GA   A
Sbjct:   90 GVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAA 271          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13
Identity = 57/196 (29.08%), Postives = 84/196 (42.86%), Query Frame = -1
Query:  108 VNQKTQGSET--LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 650
            VN  T    T  + G+A S G  +  ++  T  ISG H+NPAVT      +         Y+  Q + ++C A  +KG     +   GGG  V + GY  G+    E + +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N   A    WI+   P +GA   A
Sbjct:   77 VNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAA 272          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 60/196 (30.61%), Postives = 89/196 (45.41%), Query Frame = -1
Query:  123 AGTATAIV-NQKTQGSET----LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYG--EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 671
            AG+ + +  N+ T+   T    L+  A +    + V +    +ISG H+NPAVT       +       +Y  AQ++ S+ A   LK        GG+ VP    SAG G   AF  E +++F L++              G +A IA+G  V  NIL  G  +G SMNP    GPAV    +   W+Y   P++G
Sbjct:   36 AGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK-----FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVG 226          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 53/182 (29.12%), Postives = 80/182 (43.96%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM---GGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNN---YKAIWIYLTAPILGALCGA 614
            G+A S G  +  ++  T  ISG H+NPAVT      +         YI  Q + ++C A  +KG    +    GGG  V ++GY  G+    E + +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N    +   WI+   P +GA   A
Sbjct:   92 GIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAA 273          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 62/213 (29.11%), Postives = 93/213 (43.66%), Query Frame = -1
Query:   96 GTATAIVNQKTQGSET-LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP----------IMGGGVTVPSA-GYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVA----------VNNYKAIWIYLTAPILGALCGAGTYS 668
            G    +V +K++G  +  I +    GLAV + +   G ISGAH+NPAVTI  A +  FPW  VP YI +QI+ +   A  +   + P           +    T P+   YG     E I +  L+             G L  + VG  V    L  G  TG ++NP R  GP +A           +++   W+ +  PI+G + GA  Y+
Sbjct:   20 GVVANVVLKKSKGHNSGWIVITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKLADG-LNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGASLYN 231          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 52/191 (27.23%), Postives = 86/191 (45.03%), Query Frame = -1
Query:  120 QKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----HPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAV-----NNYKAIWIYLTAPILGA 644
            Q  +G   ++G+A + G  + V++  T  ISG H+NPAVT A    +        +Y  AQ + ++C A   + +     +   GGG    +AGY  G     E + +F L++             +     LA + +G  V++  L   P TG  +NP R+LGPA+ +       +  +WI+   P  GA
Sbjct:   61 QSGEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGA 251          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 51/189 (26.98%), Postives = 88/189 (46.56%), Query Frame = -1
Query:   51 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKG----IFHPIMGGGVTVPSAGYGEAFALEFIISFNL---MFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKP 596
            G+A+  +I +   +SG +LNPAVT+A              Y+ AQI+  +  A  L G    ++   +G     P    G+AF +E +++  L   +            +  +A  A+G  + + + I    +GG++NPVR LGP++    +   W+Y   PI+GA+  A  Y    L +E  D + +P
Sbjct:   77 GMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMYRIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTSVFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSIISGVWSHHWVYWLGPIVGAILAAFIYRC--LLQERFDVIERP 263          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 57/191 (29.84%), Postives = 84/191 (43.98%), Query Frame = -1
Query:  123 FAGTATAIVNQK-TQGSET----LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG  + +   K T G  T    LI  A +   A+ V +    +ISG H+NPAVT       +       +Y  AQ++ S  A F L+        G   +      EA  LE +++F L++              G +A IA+G  V  NIL+ G   G SMNP  + GPA+    +   W+Y   P++G
Sbjct:   35 FAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIG 225          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQPZ_SHEON1.392e-1329.17Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
AQP8_NOTAL1.392e-1329.53Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
PIP1_SOLLC1.818e-1329.12Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP12_ORYSJ1.818e-1329.08Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
TIP11_ARATH2.375e-1330.61Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
PIP11_ORYSJ2.375e-1329.12Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
GLPF_THEMA2.375e-1329.11Probable glycerol uptake facilitator protein OS=Th... [more]
PIP28_ORYSJ3.102e-1327.23Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
AQPA_DICDI3.102e-1326.98Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
TIP11_MAIZE4.051e-1329.84Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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