DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 52/182 (28.57%), Postives = 78/182 (42.86%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI---MGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 614
            G+A S G  +  ++  T  ISG H+NPAVT      +         Y+  Q + ++C A  +KG    +    GGG    + GY  G+    E + +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N   A    WI+   P +GA   A
Sbjct:   91 GIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAA 272          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 53/182 (29.12%), Postives = 79/182 (43.41%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM---GGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNN---YKAIWIYLTAPILGALCGA 614
            G+A S G  +  ++  T  ISG H+NPAVT      +         YI  Q + ++C A  +KG    +    GGG  V + GY  G+    E + +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N    +   WI+   P +GA   A
Sbjct:   95 GIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAA 276          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 53/188 (28.19%), Postives = 91/188 (48.40%), Query Frame = -1
Query:   81 TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGY----GEAFALEFIISFN--LMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYK-AIWIYLTAPILGALCGAGTYSAVKLP 623
            T++ ++ + GLA+  +  + G +SG H+NPA+T+A              Y+ AQ++ ++  A  L  +      G + V +       G+A  +E I++F   L             VG  A +++G +V L  L+    TG SMNP R+ GPAV +N +  + W++   PI+GA+  A  Y  +  P
Sbjct:   41 TILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAMLAAILYFYLLFP 227          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 57/200 (28.50%), Postives = 88/200 (44.00%), Query Frame = -1
Query:   72 NQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYGE--AFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED 647
            +  T G    + LA +  LAV V +    +ISG H+NPA+T                Y  AQ++ ++ A   L+     +  GG+  P    ++G G+  A  LE  ++F LM+              G +A +AVG  +  N+L  GP  G  MNP R  GPA+    ++  W+Y   P +GA      Y  + +P  D
Sbjct:   56 DMSTPGGLVAVSLAHALALAVAVAVAV--NISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLR-----LTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSAD 248          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 53/182 (29.12%), Postives = 79/182 (43.41%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIM---GGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNN---YKAIWIYLTAPILGALCGA 614
            G+A S G  +  ++  T  ISG H+NPAVT      +         YI  Q + ++C A  +KG    +    GGG  V + GY  G+    E + +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N    +   WI+   P +GA   A
Sbjct:   92 GIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAA 273          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 54/193 (27.98%), Postives = 86/193 (44.56%), Query Frame = -1
Query:  117 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI-----FHPIMGGGVTV--PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGAL 674
            F G  + I N    G   L+  A + GLA+ ++I + G+ISG H NPAV++A   +       +  Y  +Q+   +  A   K +     F    G    +        EA  +E +++  L+            +G LA  ++G +V+++IL  G  +G  MNP R  GPAV    +   WIY   P+L  L
Sbjct:   52 FIGCLSVIENSPNTG---LLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGL 241          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13
Identity = 55/183 (30.05%), Postives = 79/183 (43.17%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP----IMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 614
            G+A + G  +  ++  T  ISG H+NPAVT      +         YI  Q + ++C A  +KG F P     +GGG    + GY  G     E I +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N   A    WI+   P +GA   A
Sbjct:   89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKG-FQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAA 270          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13
Identity = 53/188 (28.19%), Postives = 91/188 (48.40%), Query Frame = -1
Query:   81 TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGY----GEAFALEFIISFN--LMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYK-AIWIYLTAPILGALCGAGTYSAVKLP 623
            T++ ++ + GLA+  +  + G +SG H+NPA+T+A              Y+ AQ++ ++  A  L  +      G + V +       G+A  +E I++F   L             VG  A +++G +V L  L+    TG SMNP R+ GPAV +N +  + W++   PI+GA+  A  Y  +  P
Sbjct:   41 TILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAVLAAILYFYLLFP 227          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 53/182 (29.12%), Postives = 78/182 (42.86%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 614
            G+A + G  +  ++  T  ISG H+NPAVT      +         YI  Q + ++C A  +KG     +   GGG  V + GY  G     E + +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N   A    WI+   P +GA   A
Sbjct:   90 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAA 271          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 54/183 (29.51%), Postives = 79/183 (43.17%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP----IMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 614
            G+A + G  +  ++  T  ISG H+NPAVT      +         YI  Q + ++C A  +KG F P     +GGG    + GY  G     E I +F L++             +     LA + +G  V L  L   P TG  +NP R+LG A+  N   A    W++   P +GA   A
Sbjct:   89 GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKG-FQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAA 270          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PIP13_ORYSJ4.051e-1328.57Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP13_MAIZE4.051e-1329.12Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
AQP5_RAT4.051e-1328.19Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
TIP31_ORYSJ5.290e-1328.50Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE5.290e-1329.12Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
AQP8_RAT5.290e-1327.98Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
PIP13_ARATH6.910e-1330.05Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
AQP5_MOUSE6.910e-1328.19Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
PIP15_ARATH9.024e-1329.12Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP12_ARATH9.024e-1329.51Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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