DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.368e-43
Identity = 94/216 (43.52%), Postives = 131/216 (60.65%), Query Frame = -1
Query:   51 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHP-----IMGGGV---TVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKP 674
            FAG +  +VN+      TL G+A   GL V V+I S GH+SGAH NPAV+IAFA+ K FP+  VP YI AQ++ S  AA  L+ +FH       + G V   T PS     +F +EFI +FNLMF            G  AGIA+GAT++L+IL +GP +G SMNP R+LGPA+    YK +W+Y+ +P++GAL GA TY  ++  ++    + +P
Sbjct:   57 FAGCSAIVVNETYGKPVTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIVSPVIGALSGAWTYGLLRSTKKSYSEIIRP 272          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.084e-42
Identity = 86/210 (40.95%), Postives = 127/210 (60.48%), Query Frame = -1
Query:   54 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAK 674
            FAG     +N    G  T  G+A   GLAVMV++ + GHISGAH NPAVT+AFA    FPW+ +P Y+ AQ++ +  A+  L+ +F   H    G  T+P+    ++  +E I +F LMF           +GELAG+AVGAT++LN+LIAGP +G SMNP R++GPA+    Y +IW+Y+  P++GA+ GA  Y+ ++   +    + K
Sbjct:   58 FAGCGAVTINASKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPG--TLPTGSEVQSLVIEIITTFYLMFVISGVATDNRAIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGEYTSIWVYVVGPVVGAVAGAWAYNLIRFTNKPLREITK 265          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.208e-41
Identity = 87/209 (41.63%), Postives = 124/209 (59.33%), Query Frame = -1
Query:   66 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGG------VTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTD 674
            FAG     V +K +G+ T  G+A + G AVM ++ + GH+SGAHLNPAVT+ FA    FPW+  P Y  AQ  A+  A+  L+     +M GG       T+P   + ++  +EF+I+F LMF           VG +AG+AVG T+MLN+L AGP +G SMNP R++GPA+  + Y A+W+Y+  P  GA  GA  YS ++L  + TD
Sbjct:   71 FAGLGAITVEEK-KGAVTFPGVAVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLR-----LMFGGRHAPVPATLPGGAHAQSLVIEFVITFYLMFVIMAVATDDQAVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARSIGPALVGSKYTALWVYILGPFAGAAAGAWAYSLIRLTGDRTD 273          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 77/206 (37.38%), Postives = 112/206 (54.37%), Query Frame = -1
Query:   30 QKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV-GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSFR 644
            Q + G   L+  A + GL+V+VV+ S GHISGAHLNP++TIAFA    FPW  VP+YI AQ + +  A      ++        T P+     AF +E I +  ++F             G L G  +G  + L +LI GP +GGSMNP R+LGPAV   +++ +WIY+TAP++GA+ G  TY ++ L      +   P+     R
Sbjct:   70 QLSGGHVGLLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVYGVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQNLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTYRSISLKTRPCPSPVSPSVSSLLR 275          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP21_ARATH (Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33
Identity = 82/199 (41.21%), Postives = 112/199 (56.28%), Query Frame = -1
Query:  108 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----------HPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGA 674
            FAG A   VN +     TL+G+A   G+ +MV++   GH+S AH NPAVT+A A+ + FP   VP YI  Q++ S  A+  L+ +F          H +  G  + PS    +AF +EFII+  LM              EL G+ +GATV LN++ AG  +G SMNP R++GPA+    YK IWIYL AP LGA+ GA
Sbjct:   62 FAGCAAIAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLS-AHFNPAVTLALASSQRFPLNQVPAYITVQVIGSTLASATLRLLFDLNNDVCSKKHDVFLG--SSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKRTTEELEGLIIGATVTLNVIFAGEVSGASMNPARSIGPALVWGCYKGIWIYLLAPTLGAVSGA 257          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP41_ORYSJ (Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25
Identity = 67/174 (38.51%), Postives = 89/174 (51.15%), Query Frame = -1
Query:   84 LAVMVVILSTGHISGAHLNPAVTIAFAALKHFP-WKHVPVYIGAQIMASLCAAFALKGIFHPIMG---GGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKL 593
            +  M V      +  AH NPAVTI FAA + FP W  +P+Y+ AQ+  SL A  ++  +  P      G   V   G    F +EF+ S  LM               + GIA+GA V    L+ GP +GGSMNP RTLGPA+ +  Y  +WIY+ AP+ G L GA    AV+L
Sbjct:   94 VVAMTVAFVLSWLGPAHFNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGTRLPFLMEFLASAVLMIVIATVATDGTAGKTVGGIAIGAAVGGLGLVIGPVSGGSMNPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRL 267          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 71/203 (34.98%), Postives = 104/203 (51.23%), Query Frame = -1
Query:   33 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP------SAGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED-----TDALAKPA--TKGSF 596
            GL++  ++   GHISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V       SAG+G    +E II+F L+F              G +A +A+G +V +  L A   TG SMNP R+ GPAV + N++  WIY   PI+GA+   G Y  V  P+ +      +A +K A  TKGS+
Sbjct:   78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLSAGHG--LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRRFKEAFSKAAQQTKGSY 277          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 67/193 (34.72%), Postives = 96/193 (49.74%), Query Frame = -1
Query:   81 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV---PSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTYSAVKLP 614
            G+A + GL V+ +  + GHISG H NPAVT+  AA   F W+ VP YI AQ++ ++ AA  L  I   + G  +      + GYG+          A   E ++S   +F            G  A I +G  + L  LI+ P T  S+NP R+ GPA+ V  +  + +W++  API GAL GA  Y  V  P
Sbjct:   41 GVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAYRLVGTP 232          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 67/193 (34.72%), Postives = 96/193 (49.74%), Query Frame = -1
Query:   81 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV---PSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTYSAVKLP 614
            G+A + GL V+ +  + GHISG H NPAVT+  AA   F W+ VP YI AQ++ ++ AA  L  I   + G  +      + GYG+          A   E ++S   +F            G  A I +G  + L  LI+ P T  S+NP R+ GPA+ V  +  + +W++  API GAL GA  Y  V  P
Sbjct:   41 GVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG-FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALEQLWLFWLAPIAGALVGALAYRLVGTP 232          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 70/218 (32.11%), Postives = 102/218 (46.79%), Query Frame = -1
Query:   66 FAGTATAIVNQKTQGS-ETLIGL---AGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG--EAFALEFIISFNLMFXXXXXXXXXXXV-GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAV--------KLPEEDTD 674
            F+G  +A+   K  G  +T++GL   A +  L V V++ +  H+SG H+NPAVT+  AA  H       +Y  AQ++ S  A   L  +        V  P+ G G   A A+E +++F+L+F             G L  + VG  V  NIL  GP +G SMNP R+ GPA+A   +   WIY   P++G       Y  +         LP  D D
Sbjct:   33 FSGVGSAMAAAKLGGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRNDGD 250          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
NIP31_ARATH8.368e-4343.52Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
NIP11_MAIZE7.084e-4240.95Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]
NIP14_ORYSJ1.208e-4141.63Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica G... [more]
NIP71_ARATH5.437e-3437.38Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP21_ARATH6.011e-3341.21Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1... [more]
NIP41_ORYSJ2.705e-2538.51Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica G... [more]
AQP4_BOVIN6.235e-2234.98Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQPZ_BORPA1.064e-2134.72Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR1.064e-2134.72Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
TIP43_ORYSJ2.369e-2132.11Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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