DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 67/198 (33.84%), Postives = 95/198 (47.98%), Query Frame = -1
Query:   72 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVT---VPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA--IWIYLTAPILGALCGAGTYSAVKLPEED 620
            L+G++ + GL V+ +  + GHISG HLNPAVTI   A   F  K +  YI AQ++  + A   L  I    MG   T     S GYGE          A   E +++   +             G  A IA+G  + L  LI+ P T  S+NP R+ G A+ V ++    +W++  APILGAL GA  Y  +    +D
Sbjct:   35 LLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEIVMAMMFLLVILGATDQRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVALYVGDWATAQLWLFWVAPILGALLGAVAYKLISGSNKD 231          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 57/190 (30.00%), Postives = 88/190 (46.32%), Query Frame = -1
Query:   75 TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG------EAFALEFIISFNLMFXXXXXXXXXXXVGELAG-IAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEE 623
            TL  +A +  LA  V++ +  H+SG HLNPAVT+      H       +Y+ AQ++AS  A   L+      + GG+  P    G      +   +E I++F+L+F                G +  G  V  N L  G  TG SMNP R+ GPA+A  ++   W+Y   P+LG       Y ++ L ++
Sbjct:   61 TLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLR-----FLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQK 245          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 56/190 (29.47%), Postives = 89/190 (46.84%), Query Frame = -1
Query:   81 GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIIS--FNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 632
            G   ++ +A + GL +  ++ S GH+SGAH+NPAVT AF             YI AQ++ ++  A  L G+    + G + +    P    G+A  +E  ++  F L             +G ++ +A+G ++ L  L     TG SMNP R+  PAV   N+   W+Y   PI+G   G   Y  +  P
Sbjct:   37 GPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS-LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRNFTNHWVYWVGPIIGGALGGLVYDFILFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 67/198 (33.84%), Postives = 95/198 (47.98%), Query Frame = -1
Query:   72 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVT---VPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA--IWIYLTAPILGALCGAGTYSAVKLPEED 620
            L+G++ + GL V+ +  + GHISG HLNPAVTI   A   F  K +  YI AQ++  + A   L  I    MG   T     S GYGE          A   E +++   +             G  A IA+G  + L  LI+ P T  S+NP R+ G A+ V ++    +W++  APILGAL GA  Y  +    +D
Sbjct:   35 LLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMTMMFLLVILGATDQRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVALYVGDWATAQLWLFWVAPILGALLGAVAYKLISGSNKD 231          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 68/202 (33.66%), Postives = 98/202 (48.51%), Query Frame = -1
Query:  111 FAGTATAIVNQKTQGSETL-----IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS----AGYG--EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPIL-GALCG 674
            FAG  +A+   K      L     + +A +   A+ V +    +ISG HLNPAVT+  A   +        Y  AQ + S+ A   L  + +     G +VP+    AG G  E   +E +++F L++              G +A IA+G  V  NIL AGP +GGSMNP R+ GPAV   ++  IWIY   P++ GAL G
Sbjct:   33 FAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTN-----GESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAG 229          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 56/186 (30.11%), Postives = 90/186 (48.39%), Query Frame = -1
Query:   81 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIIS--FNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 620
            ++ +A + GLA+  ++ S GHISGAH+NPAVT AF             Y+ AQ++ ++  A  L  +  P + G + +    P+   G+A  +E  ++  F L             +G +A +AVG ++ L  L     TG  MNP R+  PA+   N+   W+Y   PI+G   G+  Y  +  P
Sbjct:   41 VLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA-LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLLYDFLLFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 58/194 (29.90%), Postives = 92/194 (47.42%), Query Frame = -1
Query:   54 TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----HPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAK 623
            +++ +A +  L   + +  T   SGAH NPAVT+AF    H        Y+ AQ++ +   A  L G+        +G  V   S   G+A A+E +++  L+             G  A + +G +V L  LI    TG SMNP R+ GPA+ +  +   W++   P++GAL  +  Y+ V  P  DT  LA+
Sbjct:   54 SVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM-IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKFTVHWVFWVGPLMGALLASLIYNFVLFP--DTKTLAQ 244          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 62/198 (31.31%), Postives = 95/198 (47.98%), Query Frame = -1
Query:   60 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYG--EAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDAL 620
            L G+A +T LA  V++ +  H+SG HLNPAVT+A  A  H       +Y+ AQ++AS  A   L+      + GG+  P     +G G  +   +E I++F+L+F                   L G+ VGA    N +  G  +G SMNP R+ GPA+A   +   WIY   P++G       Y ++ L +   + L
Sbjct:   58 LAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLR-----YLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPGFGPLLTGLIVGA----NTIAGGNFSGASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAGLVYESLFLVKRTHEPL 246          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 64/195 (32.82%), Postives = 90/195 (46.15%), Query Frame = -1
Query:  123 FAGTATAIVNQKTQGSETLIGL--AGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP------SAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAG---IAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG  +A+      G+ TL+GL         V+ V++S GHISG HLNPAVT+      H       +Y   Q++AS  A F L       + GG+  P         Y +    E I++F+L+F            G L G   +  G  V  NIL  G  +G SMNP R+ GPA+   N+   W+Y   P++G
Sbjct:   33 FAGVGSAMATDSLVGN-TLVGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLS-----YLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKK-GSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIG 220          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 57/190 (30.00%), Postives = 88/190 (46.32%), Query Frame = -1
Query:   81 GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIIS--FNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 632
            G   ++G A + GLA   ++ + GH+SG H+NPA+T+AF             Y+ AQ++ +L  A  L G+    + G + +    PS G G+   +E +++  F L              G  A + VG ++ L  L   P TG  MNP R+  PAV   N+   W++   P+LGA   A  Y     P
Sbjct:   37 GPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGRPGS-AALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHWVFWAGPLLGAALAALLYELALCP 225          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQPZ_VIBVY4.182e-1833.84Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
TIP41_MAIZE5.462e-1830.00Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
MIP_RANPI5.462e-1829.47Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQPZ_VIBVU5.462e-1833.84Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
TIP22_ARATH9.317e-1833.66Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
MIP_HUMAN9.317e-1830.11Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQP6_HUMAN9.317e-1829.90Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP41_ORYSJ1.217e-1731.31Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH1.217e-1732.82Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
MIP_CHICK1.217e-1730.00Lens fiber major intrinsic protein OS=Gallus gallu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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