DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 66/206 (32.04%), Postives = 103/206 (50.00%), Query Frame = -1
Query:   66 IGLAGST---GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG--GVTV----PSAGYG----------EAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILG-ALCGAGTYSAVKLPEEDTD 617
            IG AG +   GL ++ +  + GHISG H+NPAV+I   A K FP   +  YI AQ++  +  A    G+ + I GG  G ++     S GYG               E +++F  +             G  A IA+G ++ L  LI+ P T  S+NP R+ GPA+ V ++    +W++  API+G AL G   ++ +  P E+T+
Sbjct:   36 IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGA----GVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG-FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVGDWAIAELWLFWLAPIVGAALAGLFYHAFLDEPGEETE 236          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 57/205 (27.80%), Postives = 102/205 (49.76%), Query Frame = -1
Query:   81 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAG---IAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 674
            F G  +A+  Q      +++ +A + GL + +++ + GH+SGAH+NPAVT+A     H  +     Y+ AQ++ ++  A  L  I    + G + V     +A  G+A  +E  ++  L+             G+  G   +++G +V L  L+    TG SMNP R+L PAV    +   W++   P++GA+ G+  Y+ +  P
Sbjct:   25 FFGLGSAL--QWASSPPSVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVL--CIFASTDERRGDNLGSPALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSLLYNYLLFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 57/192 (29.69%), Postives = 94/192 (48.96%), Query Frame = -1
Query:   81 QGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAG---IAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 635
            Q   +++ +A + GL +  ++ + GHISGAH+NPAVT+A     H        Y+ AQ++ ++  A  L  I    + G + V     S   G+A  +E  ++  L+             GE  G   +++G +V L  L+    TG SMNP R+L PAV    +   W++   P++GA+ G+  Y+ V  P
Sbjct:   36 QALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERR--GENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 55/185 (29.73%), Postives = 85/185 (45.95%), Query Frame = -1
Query:   75 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV-PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGE--LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEE 620
            L+ LA +   A+   + ++ H+SG H+NPAV+                Y  AQ++ S+ AA  L+ + + +   G  V P  G G  F LE +++F LM+                +A +A+G  V  NIL+ GP  G  MNP    GP++    +   WI+   P+LGA   A  Y    +P E
Sbjct:   58 LLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIE 242          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 55/186 (29.57%), Postives = 88/186 (47.31%), Query Frame = -1
Query:   81 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIIS--FNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 620
            ++ +A + GLA+  ++ + GHISGAH+NPAVT AF             YI AQ++ ++  A  L  +  P + G + +         G+A  +E  ++  F L             +G +A +AVG ++ L  L     TG  MNP R+  PA+   N+   W+Y   PI+G   G+  Y  +  P
Sbjct:   39 VLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFLLFP 223          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 55/186 (29.57%), Postives = 88/186 (47.31%), Query Frame = -1
Query:   81 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIIS--FNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 620
            ++ +A + GLA+  ++ + GHISGAH+NPAVT AF             YI AQ++ ++  A  L  +  P + G + +         G+A  +E  ++  F L             +G +A +AVG ++ L  L     TG  MNP R+  PA+   N+   W+Y   PI+G   G+  Y  +  P
Sbjct:   41 VLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFLLFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 56/191 (29.32%), Postives = 88/191 (46.07%), Query Frame = -1
Query:   63 TLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI----FHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDA 623
            +++ +A +  LA    +  +   SGAH NPAVT+A+    H        YI AQ+  +   A  L G+        +G  V   S   G+A A+E +++  L+            +   A + +G +V L  LI    TG SMNP R+ GPAV V  +   WI+   P+ GA+  +  Y+ +  P+  T A
Sbjct:   51 SVLQIAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNFILFPDTKTVA 240          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 58/184 (31.52%), Postives = 86/184 (46.74%), Query Frame = -1
Query:  108 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 620
            ++G+A + G  + +++  T  ISG H+NPAVT      +        +Y+ AQ + ++C    +KG    F+   GGG    SAGY  G   A E I +F L++             +     LA + +G  V +  L   P TG  +NP R+LG AV  NN KA    WI+   P +GA   A
Sbjct:   84 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAA 267          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: GLPF_BACSU (Glycerol uptake facilitator protein OS=Bacillus subtilis GN=glpF PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 62/188 (32.98%), Postives = 88/188 (46.81%), Query Frame = -1
Query:   93 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFAL--------KGIFHPIMGGGV--TVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVA----------VNNYKAIWIYLTAPILGALCGAGTYSA 596
            GL V +   + G ISGAHLNPA+TIA A +  FPWK VPVYI AQ++ ++  A  +        K    P    GV  T PS  +  A  L  +I   ++               L  + VG  ++   +  G +TG ++NP R LGP +A           +N+K  W+ +  PILG   G   Y+A
Sbjct:   45 GLGVAMAAYAVGGISGAHLNPALTIALAFVGDFPWKEVPVYIAAQMIGAIIGAVIIYLHYLPHWKSTDDPAAKLGVFSTGPSIPHTFANVLSEVIGTFVLVLGILAIGANQFTEGLNPLIVGFLIVAIGISLGGTTGYAINPARDLGPRIAHAFLPIPGKGSSNWKYAWVPVVGPILGGSFGGVFYNA 232          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 63/213 (29.58%), Postives = 96/213 (45.07%), Query Frame = -1
Query:   99 NLWAHLC*YFAGT--ATAIVNQKTQG-----SETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGE-LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTY 701
            N+W  L   F GT    +I    T G     + T+  +A + GL V  +  + GH+SG H+NPAVTI               YI +Q + ++  A  +K      + GG+ V    P    G+   +E +I+F L+F             +  A +A+G ++    L A   TG SMNP R+ GPAV + N+   W+Y   PI+G +     Y
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQIAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVY 233          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQPZ_GLOVI7.887e-1732.04Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
AQP2_RAT7.887e-1727.80Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQP2_HUMAN7.887e-1729.69Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
TIPA_PHAVU1.030e-1629.73Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
MIP_RAT1.030e-1629.57Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE1.030e-1629.57Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQP6_MOUSE1.345e-1629.32Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
PIP26_MAIZE1.757e-1631.52Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
GLPF_BACSU1.757e-1632.98Glycerol uptake facilitator protein OS=Bacillus su... [more]
AQP_AEDAE1.757e-1629.58Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
back to top