DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 60/209 (28.71%), Postives = 91/209 (43.54%), Query Frame = -1
Query:   90 TATAIVNQKTQ----GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAV 665
            T   ++  K Q    G   L+G+A + G  + V++  T  ISG H+NPAVT      +         Y+ AQ + ++C    +K      +  +GGG    + GY  G A   E I +F L++             +     LA + +G  V +  L   P TG  +NP R+ G AV  NN KA    WI+   P +GAL  A  +  +
Sbjct:   52 TVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYI 260          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 54/194 (27.84%), Postives = 89/194 (45.88%), Query Frame = -1
Query:   81 NQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGV----TVPSAGYGEAFALEFIISFNLMF-XXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 647
            NQ +  ++  + ++ + GL++  +  S GHISGAHLNPAVT+              +YI AQ + ++ A   L GI   + G  +      P    G+   +E I +  L+             +G  A +A+G +V L  L+A   TG  +NP R+ G AV  +N++  W++   P +G       Y  +  P
Sbjct:   42 NQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAP 235          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 59/191 (30.89%), Postives = 89/191 (46.60%), Query Frame = -1
Query:  123 FAGTATAIVNQK--TQGSETLIGLAGST---GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG+ + I   K    G+ T  GL  ++     A+ V +    +ISG H+NPAVT       +       VYI AQ++ S+ A+  L  +    +         G G A  LE +++F L++              G +A IA+G  V  NIL+ G  TG SMNP  + GPAV   ++   W+Y   P++G
Sbjct:   35 FAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIG 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 69/218 (31.65%), Postives = 96/218 (44.04%), Query Frame = -1
Query:   60 FAGTATAIVNQK-TQGSET----LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYG--EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDAL 674
            FAG+ + +   K T G  T    LI  + +  LA+ V +    +ISG H+NPAVT       +       VY  AQ++ S+ A   LK     I  GG  V     SAG G   A   E +++F L++              G +A IA+G  V  NIL  G   G SMNP  + GPAV    +   W+Y   P +GA   A  Y  + + +   D L
Sbjct:   35 FAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLK-----IATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQL 247          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 62/210 (29.52%), Postives = 95/210 (45.24%), Query Frame = -1
Query:   30 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSFR 620
            ++G+A + G  + +++  T  +SG H+NPAVT      +        +YI AQ + ++C    +KG    F+   GGG    S GY  G   A E I +F L++             +     LA + +G  V +  L   P TG  +NP R+LG AV  N +KA    WI+   P++GA   A  +  V        + AK  +  SFR
Sbjct:   85 ILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVL-----RASAAKLGSSSSFR 289          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 53/186 (28.49%), Postives = 87/186 (46.77%), Query Frame = -1
Query:   81 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV----PSAGYGEAFALEFIIS--FNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 620
            ++ +A + GLA+  ++ + GHISGAH+NPAVT AF             Y+ AQ++ ++  A  L  +    + G + +    P    G+A  +E  ++  F L             +G +A +AVG ++ L  L     TG  MNP R+  PA+   N+   W+Y   PI+G    +  Y  +  P
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLASLLYDFLLFP 225          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 56/188 (29.79%), Postives = 87/188 (46.28%), Query Frame = -1
Query:  108 GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI---FHPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGA 632
            G   ++G+A + G  + +++  T  +SG H+NPAVT+     +        +Y+ AQ + ++C    +KG     +   GGG    +AGY  G   A E I +F L++             +     LA + +G  V +  L   P TG  +NP R+LG AV  NN KA    WI+   P +GA   A
Sbjct:   78 GGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAA 265          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 66/204 (32.35%), Postives = 96/204 (47.06%), Query Frame = -1
Query:   66 LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGG-------GVTVPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTYSAVKLPEEDTD 620
            L+G+A + GL V+ +  + GHISG HLNPAVT+   A   F  K V  YI AQ++  L A     GI + I  G       G    + GYGE          A   E +++   +             G  A IA+G  + L  LI+ P T  S+NP R+   A+ V ++    +W++  API+G + GA  Y  + L +E  D
Sbjct:   35 LLGVALAFGLTVLTMAFAIGHISGCHLNPAVTVGLWAGGRFDTKDVAPYIIAQVIGGLIAG----GILYVIATGQAGFDVVGSGFAANGYGEHSPGQYSMLAALVSEIVMTMMFLIVIMGATDKRAPQG-FAPIAIGLCLTLIHLISIPVTNTSVNPARSTAVAMYVGDWAVSQLWLFWVAPIVGGVLGAVIYKNL-LGKESND 232          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 54/194 (27.84%), Postives = 87/194 (44.85%), Query Frame = -1
Query:   81 NQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI----MGGGVTVPSAGYGEAFALEFIISFNLMF-XXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 647
            NQ    ++  + ++ + GL++  +  S GHISGAHLNPAVT+              +YI AQ + ++ A   L GI   +    +G     P    G+   +E I +  L+             +G    +A+G +V L  L+A   TG  +NP R+ G +V  +N+K  WI+   P +G       Y  +  P
Sbjct:   42 NQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFKDHWIFWVGPFIGGALAVLIYDFILAP 235          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = -1
Query:   81 NQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI----MGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV-GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 647
            NQ T   +  + ++ + GL++  +  S GHISGAHLNPAVT+              +YI AQ + ++ A   L GI   +    +G     P    G+   +E I +  L+              G    +A+G +V L  L+A   TG  +NP R+ G +V  +N++  WI+   P +GA      Y  +  P
Sbjct:   42 NQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAP 235          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PIP28_ARATH8.720e-1628.71Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
AQP1_PIG8.720e-1627.84Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
TIP1_MEDTR1.139e-1530.89Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_ORYSJ1.139e-1531.65Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
PIP23_ORYSJ1.139e-1529.52Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
MIP_RABIT1.139e-1528.49Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
PIP24_ORYSJ1.487e-1529.79Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
AQPZ_VIBPA1.487e-1532.35Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQP1_CANFA1.487e-1527.84Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.487e-1528.35Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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