DT214566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PT ++ A I NSTS+ E+F R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRINSKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP+ ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT + A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++ Sbjct: 306 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPSGDPAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEVREDLAALEKDYEE 429
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.448e-17 Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L ++++ Sbjct: 311 KYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDFEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNASVAVIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 39/122 (31.97%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 279 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 620 +Y+ ++RG + T++V + V+NK + V+W P K +C PP+ + A + N+T+I + ++R+ ++F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y Sbjct: 312 KYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PPT ++ A I NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L ++++ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDFEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16 Identity = 39/124 (31.45%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP+ ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16 Identity = 39/124 (31.45%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ M+RG + K+V+ + ++ K + FV+W P K + PP+ ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434 The following BLAST results are available for this feature:
BLAST of DT214566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214566 ID=DT214566; Name=DT214566; organism=Citrus sinensis; type=EST; length=861bpback to top |