DT214566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.126e-61 Identity = 112/121 (92.56%), Postives = 120/121 (99.17%), Query Frame = -2 Query: 258 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 620 RYLTASAMFRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS+VCDIPP GLKM++TFIGN+T+IQEMF+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT Sbjct: 306 RYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSATFIGNNTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 426
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 236.884 bits (603), Expect = 1.126e-61 Identity = 113/121 (93.39%), Postives = 119/121 (98.35%), Query Frame = -2 Query: 258 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 620 RYLTASAMFRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS+VCDIPP GLKMA TFIGNST+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT Sbjct: 309 RYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 429
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_TETTH (Tubulin beta chain OS=Tetrahymena thermophila GN=BTU1 PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.471e-61 Identity = 111/122 (90.98%), Postives = 120/122 (98.36%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTASA+FRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS++CDIPP GLKMA TF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_TETPY (Tubulin beta chain OS=Tetrahymena pyriformis GN=BETA-TT1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.471e-61 Identity = 111/122 (90.98%), Postives = 120/122 (98.36%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTASA+FRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS++CDIPP GLKMA TF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.471e-61 Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTASAMFRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKS+VCDIPP LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDA A Sbjct: 311 RYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAIA 432
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.471e-61 Identity = 111/122 (90.98%), Postives = 120/122 (98.36%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTASA+FRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS++CDIPP GLKMA TF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.921e-61 Identity = 112/122 (91.80%), Postives = 120/122 (98.36%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTASAMFRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS+VCDIPP GLKM+ TF+GNST+IQEMF+RVS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNMKSSVCDIPPKGLKMSVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.921e-61 Identity = 112/122 (91.80%), Postives = 119/122 (97.54%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTASA+FRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS+VCDIPP GLKMA TF+GNST+IQEMF+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFLGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.921e-61 Identity = 111/122 (90.98%), Postives = 119/122 (97.54%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTAS MFRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+KS+VCDIPP GLKM++TF+GNST+IQEMF+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTASCMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSATFVGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB_ACHKL (Tubulin beta chain OS=Achlya klebsiana PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.508e-61 Identity = 111/122 (90.98%), Postives = 120/122 (98.36%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTA+ MFRG+MSTKEVDEQMLNVQNKNSSYFVEWIPNN+K++VCDIPP GLKM++TFIGNST+IQEMF+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 307 RYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 428 The following BLAST results are available for this feature:
BLAST of DT214566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214566 ID=DT214566; Name=DT214566; organism=Citrus sinensis; type=EST; length=861bpback to top |