DT214565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29 Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = -3 Query: 136 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 360 L+KG+VYREH+ SPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCISF+A P Sbjct: 103 LEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29 Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = -3 Query: 136 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 360 L+KG+VYREH+ SPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCISF+A P Sbjct: 103 LEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS6_FLAPR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Flaveria pringlei GN=RBCS6 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 54/75 (72.00%), Postives = 67/75 (89.33%), Query Frame = -3 Query: 136 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 360 L+ G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCISF+A+KP Sbjct: 96 LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29 Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = -3 Query: 136 QKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 357 + G+VYREH SSPGYYDGRYWTMWKLPM+GCTDATQV EV E +K YP + +RIIGFDN RQVQCISF+A KP Sbjct: 104 EHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29 Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = -3 Query: 130 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 360 L+ G VYRE+H SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ E+ K YP + RIIGFDN RQVQCISFLA KP G Sbjct: 105 LEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29 Identity = 53/77 (68.83%), Postives = 67/77 (87.01%), Query Frame = -3 Query: 130 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 360 L+ G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCI F+A++P G Sbjct: 101 LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = -3 Query: 133 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 360 L+ +VYRE++ SPGYYDGRYW MWKLPM+GCTDATQVL E+ E K YP S +RIIGFDNKRQVQCISF+A KPP Sbjct: 105 LEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28 Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = -3 Query: 136 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 360 L+ +VYRE+H SPGY DGRYWTMWKLPMYGCTD QVL EV E +K YP +F+RIIGFDNKRQVQC+SF+A KP Sbjct: 106 LEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.668e-28 Identity = 53/75 (70.67%), Postives = 66/75 (88.00%), Query Frame = -3 Query: 136 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 360 L+KG+VYRE+H SPGYYDGRYWTMW+LP++G TD++QVLKE+ + + EYP SF+RIIGFDN RQVQCISF+A P Sbjct: 103 LEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.484e-28 Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = -3 Query: 136 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 360 L+KG+V+R+++SSPGYYDGRYWTMW+LP++G TDA QVLKEV E + EYP +F+RIIGFDN RQVQCISF+A+ P Sbjct: 101 LEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTP 175 The following BLAST results are available for this feature:
BLAST of DT214565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214565 ID=DT214565; Name=DT214565; organism=Citrus sinensis; type=EST; length=713bpback to top |