DT214565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS1_ACECL (Ribulose bisphosphate carboxylase small chain 1 (Fragment) OS=Acetabularia cliftonii GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = -3 Query: 133 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 315 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 53 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 113
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS1_ACEAT (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Acetabularia acetabulum GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = -3 Query: 133 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 315 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = -3 Query: 133 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 315 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = -3 Query: 133 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 315 Y D RYWTMWKLPM+GCTD +QVL ++ K +P +++R++ FD RQVQ FL +PP Sbjct: 110 YQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICGFLVHRPP 170
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = -3 Query: 133 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 315 Y D RYWTMWKLPM+GCTD +QVL E+ +P +++R++ FD RQVQ FL +PP Sbjct: 110 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS4_ACEAT (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia acetabulum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = -3 Query: 133 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 315 Y D RYWTMWKLPM+GCTD +QVL E+ +P +++R++ FD RQVQ FL +PP Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_BATOE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Batophora oerstedii GN=RBCS PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = -3 Query: 136 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 315 Y D RYWTMWKLPM+GC D +QVL E+ K +P +++R++ FD RQVQ FL +P Sbjct: 102 YQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 161
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_PROHO (Ribulose bisphosphate carboxylase small chain OS=Prochlorothrix hollandica GN=cbbS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = -3 Query: 136 YWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 300 YWTMWKLP++ T +VL EV E + EYP+ ++R++GFDN +Q Q +SF+ KP Sbjct: 52 YWTMWKLPLFHATSTQEVLGEVRECRTEYPNCYIRVVGFDNIKQCQSVSFIVHKP 106
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = -3 Query: 148 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 360 + KGW H+ P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN +Q Q S + Sbjct: 41 VSKGWNPAVEHTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
BLAST of DT214565 vs. ExPASy Swiss-Prot
Match: RBS_SYNP6 (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cbbS PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11 Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = -3 Query: 136 HSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 330 HS+P + YWTMWKLP++ C QVL EV E + EY ++R+ GFDN +Q Q +SF+ +P Sbjct: 47 HSNPEEF---YWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRP 108 The following BLAST results are available for this feature:
BLAST of DT214565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214565 ID=DT214565; Name=DT214565; organism=Citrus sinensis; type=EST; length=713bpback to top |