DT214547

Overview
NameDT214547
Unique NameDT214547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3537 contig Csv1_Contig3537:289..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_RHIME (Hydroxyacylglutathione hydrolase OS=Rhizobium meliloti GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.156e-12
Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = -3
Query:  296 LNVIKELGLKLVYAMNTHVHADHVTGTGLIK--------------SKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY----KGFTVSTVGEEIQYNPRLTKDEET 793
            L+ ++  G +L + + TH H DHV     +K              SK+PG+            D  V HGD+  F    ++V  TPGHT G V Y        P+ ++ F  D L   GCGR  F+ G++  +++S+ S++  LP DT IY  H+Y      F ++   E      R  + EET
Sbjct:   40 LDALERRGWQLTHILTTHHHGDHVAANASLKERFGLTIIGPKNEASKIPGI------------DRTVGHGDRFDFAGHPVDVIETPGHTSGHVCY------HLPEDKLLFAADTLFALGCGRL-FE-GTADTMWQSL-SRLMALPDDTAIYFGHEYTLANAHFAITVDPENSALKERAAEIEET 202          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.156e-12
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = -3
Query:  368 IKELGLKLVYAMNTHVHADHVTGTGLIKSK--VPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 784
            +K  G  L +   TH H DHV G   +K+K  V  +            D  V+ GD+ +FG   ++V ATPGHT G V+Y        P  +  FTGD L   GCGR  F+ G+   +++S+  ++  LP DT +Y  H+Y
Sbjct:   47 LKRRGWTLDFIFTTHHHLDHVEGNEALKAKYGVSIIGPKAEETKIPGIDRTVKDGDEFTFGLFRVKVIATPGHTAGEVSYY------LPDAKAVFTGDTLFALGCGRL-FE-GTPLTMFQSL-QKLVALPGDTAVYCGHEY 178          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.156e-12
Identity = 53/151 (35.10%), Postives = 73/151 (48.34%), Query Frame = -3
Query:  368 TVDRD--LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG--VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 808
            T D D  LN   + G  +    NTH H DH  G   I++      V             + VE GD +S GD   +V  TPGHT+G V Y        P   +AF GD L   GCGR  F+ G+ ++++ S+ S++  LP +T IY AH+Y
Sbjct:   33 TPDADVILNEADQAGWSITQIWNTHHHFDHAGGNETIQALTGAKVVAPRYDRHRIPGISMEVEDGDVISLGDHKAKVFYTPGHTMGHVCY------HMPMDGIAFVGDTLFALGCGRL-FE-GTPAEMWHSL-SRLAALPDETRIYCAHEY 174          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_DICDI (Hydroxyacylglutathione hydrolase OS=Dictyostelium discoideum GN=hagh PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.156e-12
Identity = 49/176 (27.84%), Postives = 78/176 (44.32%), Query Frame = -3
Query:  248 LKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY--KGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMI 769
            +K+     TH H DH  G  LIK+ +  +               +E+ + +  G L ++    P HT   V Y+  +  +  Q +  FTGD L I GCGR  F+ G+  Q+Y ++++ I  LP +TL+Y  H+Y  K    +   E    N  L    +  K  + N   + P  I
Sbjct:   47 IKINSVFTTHHHWDHAGGNNLIKTIIKDINVYGRDERFEGITKKLENNEVLKIGSLKIKTLDAPAHTSSHVLYLIEDENEPNQVKSLFTGDTLFIGGCGRL-FE-GNPEQMYNALYNVIGKLPDNTLVYVGHEYTLKNLEFAKTLESENENKELYNFYDQCKEKLANGEFTVPSSI 220          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 41/142 (28.87%), Postives = 66/142 (46.48%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            +  +K+  +KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P   +P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +   H+Y
Sbjct:   86 IETVKKHRVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLEVGSLSVKCLSTPCHTSGHICYFVSK-PGSSEPSAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPPDTKVICGHEY 224          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = -3
Query:  368 KLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLH-VEHGDKVSFG-DLFLEVRATPGHTLGCVTY-VSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 766
            K+ + + TH H DH  G   IK  VP +                V++GDK++ G D+ +    TP HT G ++Y V+G+  + P     FTGD L + GCG+  F  G++ Q+Y+S+   +  LPK T +Y  H+Y
Sbjct:   46 KIKFVLTTHHHWDHAGGNEKIKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYYVNGKEGENPA---VFTGDTLFVAGCGK--FFEGTAEQMYQSLCVTLAALPKPTQVYCGHEY 176          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: BLH_XYLFT (Beta-lactamase hydrolase-like protein OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=blh PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 64/224 (28.57%), Postives = 98/224 (43.75%), Query Frame = -3
Query:  215 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG------------------VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGF-----TVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANLVCG 802
            D  L  +++ GL + + ++TH HADH +    +K +                                  D     GD  + G +   V  +PGHTL  VTYV G+         AF  D + +   G  R DF GGS+  L+ S+ + I +LP +T ++  HDY+         STVGE+ + N  L   DE TF ++ E  +  L  PK+I  A+  N++ G
Sbjct:  192 DAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTKVQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGD--------TAFVHDTIFMPDSGTARADFPGGSARALWSSIQA-ILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQVNVLGG 406          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.392e-12
Identity = 41/142 (28.87%), Postives = 66/142 (46.48%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            ++ +K+ G+KL   + TH H DH  G   +   V G+               V H      G L ++   TP HT G + Y   + P+  +P   FTGD L + GCG+  F  G+  ++Y ++   +  LP +T +Y  H+Y
Sbjct:   90 VDAVKKHGVKLTTVLTTHHHWDHAGGNEKLVKMVSGLKVYGGDSRIGALTQKVSHLTTFQVGSLHVKCLYTPCHTSGHICYYVTK-PNSTEPPAVFTGDTLFVAGCGK--FFEGTPEEMYAALIEVLGRLPPETRVYCGHEY 228          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.737e-12
Identity = 58/167 (34.73%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  299 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXA-DLHVEHGDKVS-FGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEE 793
            L V++E  L L   + TH H DH+ G   +K   P +                VE GD+V  FG+ F+ V   PGHTLG V YV G+G         F GD L   GCGR  F+ G+ +Q+++S+  ++  LP +T IY AH+Y    ++      Q NP L +  E
Sbjct:   37 LKVLEEQSLTLDAILITHHHHDHIGGISELKRHYPNLNVVGPASEPIPGISQSVEDGDQVELFGERFM-VLGVPGHTLGHVAYV-GDG-------KLFCGDTLFSVGCGRL-FE-GTPAQMFQSL-KKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRYRE 191          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 41/142 (28.87%), Postives = 68/142 (47.89%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            ++ +K+ G+KL   + TH H DH  G   +   +PG+               V H +    G L ++   TP HT G + Y   +      P + FTGD L + GCG+  F  G++ ++YK++   +  LP +T +Y  H+Y
Sbjct:   80 VDAVKKHGVKLKTVLTTHHHWDHAGGNEKLVKLMPGLTVYGGDDRVGALTQKVTHYNTFKVGSLNVKCLFTPCHTSGHICYFVTKENSTEAPAV-FTGDTLFVAGCGK--FFEGTADEMYKALIEVLGRLPPETRVYCGHEY 218          
The following BLAST results are available for this feature:
BLAST of DT214547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GLO2_RHIME1.156e-1229.89Hydroxyacylglutathione hydrolase OS=Rhizobium meli... [more]
GLO2_OCHA41.156e-1234.75Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_MARMM1.156e-1235.10Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]
GLO2_DICDI1.156e-1227.84Hydroxyacylglutathione hydrolase OS=Dictyostelium ... [more]
GLO2_RAT1.972e-1228.87Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2C_ARATH1.972e-1233.82Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
BLH_XYLFT1.972e-1228.57Beta-lactamase hydrolase-like protein OS=Xylella f... [more]
GLO2_XENTR4.392e-1228.87Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_PHOPR5.737e-1234.73Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_DANRE9.785e-1228.87Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_45H11_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-45H11-O22-1-7.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214547 ID=DT214547; Name=DT214547; organism=Citrus sinensis; type=EST; length=813bp
AGATATTCACTTATATCTTATTTTCATCATTTCACTGATCCATACATTCT
TTAGGGGCTTAACAACTTTTTCTTTGTTATTGTTTTGTACTATACCAATT
AAGAGNCATTATATATNATTTGTACAGAGTAACTTGAACAGCAGGTACCG
AGGTTATCACCATTTGGGCATCGCCCAAGGAAGCTCATCAGGCTTTGGAG
GCCAGATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTAT
CATCTTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTT
CCTCATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTG
CTTACTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTT
CGGCAAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAAC
TTCCTCCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCT
CCAGTGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAAC
ATAGGTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGA
AGAGATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCC
TTGGAACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACT
CTTAATCAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCA
TGGCATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTA
TCAACGGTCTTGT
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