DT214547

Overview
NameDT214547
Unique NameDT214547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3537 contig Csv1_Contig3537:289..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPK (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain KT2440) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 47/168 (27.98%), Postives = 74/168 (44.05%), Query Frame = -3
Query:  242 THVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDI 745
            TH H DHV G   ++                  DL ++ GD+V    +  +V A PGHTLG + + S    DQP   + F+GD L   GCGR  F+G  + +  +   +++  LP+ T +Y AH+Y    +         NP + +  E    +     +S P  I +
Sbjct:   55 THHHNDHVGGVERLRQLTGARVCGPANERIPGRDLALDEGDRVDVLGVTFQVMAVPGHTLGHIAFFS----DQPATPILFSGDTLFAAGCGRM-FEG--TPEQMQPALARLAALPEQTQVYCAHEYTLSNLRFAKAVEPTNPHVQQRFEDVTRLRAENRISLPSTIGL 215          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_MACFA (Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 41/142 (28.87%), Postives = 65/142 (45.77%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            L+  ++ G+KL   + TH H DH  G   +     G+               + H   +  G L ++  ATP HT G + Y     P   +P   FTGD L + GCG+  F  G++ ++ K++   +  LP DT +Y  H+Y
Sbjct:   85 LDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLQSGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSR-PGGSEPPAVFTGDTLFVAGCGK--FYEGTADEMCKALLEVLGRLPPDTRVYCGHEY 223          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 40/142 (28.17%), Postives = 67/142 (47.18%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            L+ +K+ G+KL   + TH H DH  G   +     G+               V H   +  G L ++   TP HT G + Y   + P+  +P   FTGD L + GCG+  F  G+  ++Y+++   + +L  +T +Y  H+Y
Sbjct:   87 LDAVKKHGVKLTSVLTTHHHWDHAGGNEKLVKLETGLRVYGGDSRVGALTQKVSHLTSLKVGSLNVKCLCTPCHTSGHICYYVTK-PNSSEPPAVFTGDTLFVAGCGK--FFEGTPEEMYRALIEILGSLDPETRVYCGHEY 225          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: PNKD_HUMAN (Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 58/190 (30.53%), Postives = 79/190 (41.58%), Query Frame = -3
Query:  314 IKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLH-VEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY--------------------------------KGFTVSTVGEEIQYNPRL 784
            I++ G+ LV  + TH H DH  G   +  +                  H + H D VS G L +   ATPGHT G + Y+  +G     P   F+GD L + GCGRT F+G + + L  S    +  L  DTL++P H+Y                                KG   ST+GEE  YNP L
Sbjct:  158 IEKEGVTLVAILCTHKHWDHSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLL-DGEPYKGPSCLFSGDLLFLSGCGRT-FEGNAETML--SSLDTVLGLGDDTLLWPGHEYAEENLGFAGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFL 343          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_PSEE4 (Hydroxyacylglutathione hydrolase OS=Pseudomonas entomophila (strain L48) GN=gloB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 54/188 (28.72%), Postives = 85/188 (45.21%), Query Frame = -3
Query:  227 KELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIME---NLNLSYPKMIDIAVPAN 781
            K  G  L   + TH H DHV G   +K                  D+ +E G +V    L  +V A PGHTLG + Y + + P      + F+GD L   GCGR  F+ G+  Q++ S+  ++  LP+ T +Y AH+Y   T+S +       P     ++ F+++ +   +  +S P  I I    N
Sbjct:   43 KHPGWVLEAILVTHHHHDHVGGVEALKHATGAQVFGPANERIPARDIALEDGAQVHVLGLAFDVLAMPGHTLGHIAYYTAQSPTP----LLFSGDTLFAAGCGRL-FE-GTPEQMHHSL-QRLAALPEQTQVYCAHEY---TLSNLRFARAVEPHSEPVQQRFEAVTQLRADNRISLPSTIGIERQTN 220          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_METS4 (Hydroxyacylglutathione hydrolase OS=Methylobacterium sp. (strain 4-46) GN=gloB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 50/144 (34.72%), Postives = 62/144 (43.06%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG--VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            L V+ E G  L   + TH H DHV GT  +K++                  D  V  GD V  G L   V  TPGH    VTY         + R+AF GD L   GCGR          L++S+ S+   LP +T IY  HDY
Sbjct:   38 LRVLGETGWSLTDILVTHRHFDHVEGTPEVKARTGARVTAPAKAGDAVPEVDATVREGDAVRLGSLVAAVWETPGHCADHVTYWF------ERERIAFAGDTLFTLGCGRV--MESPPEVLWRSL-SRFLALPDETAIYSGHDY 172          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_HUMAN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 40/142 (28.17%), Postives = 66/142 (46.48%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            ++  ++ G+KL   + TH H DH  G   +     G+               + H   +  G L ++  ATP HT G + Y   + P   +P   FTGD L + GCG+  F  G++ ++ K++   +  LP DT +Y  H+Y
Sbjct:   85 VDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSK-PGGSEPPAVFTGDTLFVAGCGK--FYEGTADEMCKALLEVLGRLPPDTRVYCGHEY 223          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_VIBCM (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = -3
Query:  350 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLH-VEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVS 793
            L  +K+  L L   + TH H DH+ G   +  + P +              H VE GD++   D    V   PGHTLG + YV G+G         F GD L   GCGR  F+ G+  Q++ S+ +++ +LP++T +Y AH+Y    V+
Sbjct:   37 LAYLKQHDLNLKAVLITHHHHDHIGGVAELVHQFPEIHVVGPAQEPIPTLTHPVEDGDQIELFDERFMVLGLPGHTLGHIGYV-GDG-------KLFCGDVLFSAGCGRV-FE-GTMEQMFSSL-NKLLSLPEETQVYSAHEYTAANVA 174          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_VIBCH (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = -3
Query:  350 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLH-VEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVS 793
            L  +K+  L L   + TH H DH+ G   +  + P +              H VE GD++   D    V   PGHTLG + YV G+G         F GD L   GCGR  F+ G+  Q++ S+ +++ +LP++T +Y AH+Y    V+
Sbjct:   37 LAYLKQHDLNLKAVLITHHHHDHIGGVAELVHQFPEIHVVGPAQEPIPTLTHPVEDGDQIELFDERFMVLGLPGHTLGHIGYV-GDG-------KLFCGDVLFSAGCGRV-FE-GTMEQMFSSL-NKLLSLPEETQVYSAHEYTAANVA 174          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_VIBC3 (Hydroxyacylglutathione hydrolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = -3
Query:  350 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLH-VEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVS 793
            L  +K+  L L   + TH H DH+ G   +  + P +              H VE GD++   D    V   PGHTLG + YV G+G         F GD L   GCGR  F+ G+  Q++ S+ +++ +LP++T +Y AH+Y    V+
Sbjct:   37 LAYLKQHDLNLKAVLITHHHHDHIGGVAELVHQFPEIHVVGPAQEPIPTLTHPVEDGDQIELFDERFMVLGLPGHTLGHIGYV-GDG-------KLFCGDVLFSAGCGRV-FE-GTMEQMFSSL-NKLLSLPEETQVYSAHEYTAANVA 174          
The following BLAST results are available for this feature:
BLAST of DT214547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GLO2_PSEPK1.669e-1127.98Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_MACFA1.669e-1128.87Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CHICK1.669e-1128.17Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
PNKD_HUMAN2.180e-1130.53Probable hydrolase PNKD OS=Homo sapiens GN=PNKD PE... [more]
GLO2_PSEE42.180e-1128.72Hydroxyacylglutathione hydrolase OS=Pseudomonas en... [more]
GLO2_METS42.847e-1134.72Hydroxyacylglutathione hydrolase OS=Methylobacteri... [more]
GLO2_HUMAN2.847e-1128.17Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_VIBCM3.718e-1132.21Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]
GLO2_VIBCH3.718e-1132.21Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]
GLO2_VIBC33.718e-1132.21Hydroxyacylglutathione hydrolase OS=Vibrio cholera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_45H11_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-45H11-O22-1-7.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214547 ID=DT214547; Name=DT214547; organism=Citrus sinensis; type=EST; length=813bp
AGATATTCACTTATATCTTATTTTCATCATTTCACTGATCCATACATTCT
TTAGGGGCTTAACAACTTTTTCTTTGTTATTGTTTTGTACTATACCAATT
AAGAGNCATTATATATNATTTGTACAGAGTAACTTGAACAGCAGGTACCG
AGGTTATCACCATTTGGGCATCGCCCAAGGAAGCTCATCAGGCTTTGGAG
GCCAGATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTAT
CATCTTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTT
CCTCATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTG
CTTACTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTT
CGGCAAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAAC
TTCCTCCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCT
CCAGTGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAAC
ATAGGTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGA
AGAGATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCC
TTGGAACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACT
CTTAATCAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCA
TGGCATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTA
TCAACGGTCTTGT
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