DT214547

Overview
NameDT214547
Unique NameDT214547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3537 contig Csv1_Contig3537:289..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPW (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain W619) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 42/126 (33.33%), Postives = 64/126 (50.79%), Query Frame = -3
Query:  368 THVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 745
            TH H DHV G   +K                  DL ++ GD+V+   +  +V A PGHTLG + + S    DQP   + F+GD L   GCGR  F+G  + +  +   +++ +LP+ T +Y AH+Y
Sbjct:   55 THHHNDHVGGVERLKKLTGARVSGPANERIPCRDLALDEGDEVTAVGVTFQVLAVPGHTLGHIAFFS----DQPATPVLFSGDTLFAAGCGRM-FEG--TPEQMQPALARLASLPERTEVYCAHEY 173          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPG (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain GB-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = -3
Query:  284 THVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSI 745
            TH H DHV G   +K                  DL ++ GDKV    +  +V A PGHTLG + + S +GP  P   + F+GD L   GCGR  F+G  + +  +   +++  LP+ T +Y AH+Y   T+S +       P  T  ++ F+ +
Sbjct:   55 THHHNDHVGGVERLKQLSGARVCGPANERIPGRDLALDEGDKVDVLGVTFQVLAVPGHTLGHIAFFS-DGPPTP---VLFSGDTLFAAGCGRM-FEG--TPEQMQPALARLAALPEQTEVYCAHEY---TLSNLRFAKAVEPTNTHVQQRFEDV 198          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_ERYLH (Hydroxyacylglutathione hydrolase OS=Erythrobacter litoralis (strain HTCC2594) GN=gloB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11
Identity = 47/143 (32.87%), Postives = 67/143 (46.85%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGT-GLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            L   K  G  + +  NTH H DH  G   ++++    V            D  V HGD V  GD   +V    GHT G + Y        P+  +AF GD++   GCGR  F+ G   Q + S+ S+I  LP +T++Y AH+Y
Sbjct:   38 LKQAKAKGWTITHIWNTHWHPDHAGGNKDIVEATGAKVIAPQEVEKLSGIDRVVGHGDTVDIGDFTADVIDVSGHTNGHIAY------HLPEAGIAFVGDSVFALGCGRM-FE-GEPKQFWDSL-SRIKALPPETMLYCAHEY 171          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: Y2612_MYCBO (Uncharacterized protein Mb2612c OS=Mycobacterium bovis GN=Mb2612c PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = -3
Query:  314 GDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRL 628
            GDK+  G + + +  TPGHT G V +   +  +  +  + FTGD L  R  GRTD  GGS   L +S+  ++  L   T++ P H       +T+G E ++NP L
Sbjct:  120 GDKIDLGGISVNIDHTPGHTRGSVVFRVLQATNNDKD-IVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHG----NSTTIGAERRFNPFL 219          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: Y2581_MYCTU (Uncharacterized protein Rv2581c/MT2658 OS=Mycobacterium tuberculosis GN=Rv2581c PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = -3
Query:  314 GDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRL 628
            GDK+  G + + +  TPGHT G V +   +  +  +  + FTGD L  R  GRTD  GGS   L +S+  ++  L   T++ P H       +T+G E ++NP L
Sbjct:  120 GDKIDLGGISVNIDHTPGHTRGSVVFRVLQATNNDKD-IVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHG----NSTTIGAERRFNPFL 219          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_THEEB (Hydroxyacylglutathione hydrolase OS=Thermosynechococcus elongatus (strain BP-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = -3
Query:  368 IKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXAD---LHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 784
            + ELG  L    NTH H DHV     ++S+ P +                + ++ GD+V FG  + +V   PGHT G + Y +      P     F GD L   GCGR  F+ GS +Q+  S+ +Q+  LP++T ++ AH+Y
Sbjct:   40 LAELGATLRAIFNTHHHWDHVGANCALRSRFPDIAVYGSSEDQGRIPEQTVFLKAGDRVPFGQTYFDVLFVPGHTRGHIAYYA------PTTGDLFCGDTLFGGGCGRL-FE-GSPAQMLDSL-NQLRQLPEETRVWCAHEY 172          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_METNO (Hydroxyacylglutathione hydrolase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=gloB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 49/144 (34.03%), Postives = 62/144 (43.06%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG--VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            L  +KE G +L   + TH H DHV G   +K++                  D  V  GD V  G L   V  TPGH    VTY         + R+AF GD L   GCGR          L++S+ S+   LP +T IY  HDY
Sbjct:   38 LRALKETGWRLTDILVTHRHFDHVEGIPEVKARTGARVTAPAKAGDAVPEVDATVREGDVVKVGSLVGTVWETPGHCADHVTYWF------ERERLAFAGDTLFTLGCGRV--MESPPEVLWRSL-SRFLALPDETAIYSGHDY 172          
The following BLAST results are available for this feature:
BLAST of DT214547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GLO2_PSEPW3.718e-1133.33Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_PSEPG3.718e-1131.17Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_ERYLH6.342e-1132.87Hydroxyacylglutathione hydrolase OS=Erythrobacter ... [more]
Y2612_MYCBO8.284e-1134.29Uncharacterized protein Mb2612c OS=Mycobacterium b... [more]
Y2581_MYCTU8.284e-1134.29Uncharacterized protein Rv2581c/MT2658 OS=Mycobact... [more]
GLO2_THEEB8.284e-1132.39Hydroxyacylglutathione hydrolase OS=Thermosynechoc... [more]
GLO2_METNO8.284e-1134.03Hydroxyacylglutathione hydrolase OS=Methylobacteri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_45H11_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-45H11-O22-1-7.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214547 ID=DT214547; Name=DT214547; organism=Citrus sinensis; type=EST; length=813bp
AGATATTCACTTATATCTTATTTTCATCATTTCACTGATCCATACATTCT
TTAGGGGCTTAACAACTTTTTCTTTGTTATTGTTTTGTACTATACCAATT
AAGAGNCATTATATATNATTTGTACAGAGTAACTTGAACAGCAGGTACCG
AGGTTATCACCATTTGGGCATCGCCCAAGGAAGCTCATCAGGCTTTGGAG
GCCAGATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTAT
CATCTTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTT
CCTCATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTG
CTTACTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTT
CGGCAAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAAC
TTCCTCCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCT
CCAGTGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAAC
ATAGGTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGA
AGAGATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCC
TTGGAACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACT
CTTAATCAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCA
TGGCATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTA
TCAACGGTCTTGT
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