DT214526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_PIG (40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_MOUSE (40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_MACFA (40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_HUMAN (40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_BOVIN (40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.133e-30 Identity = 60/106 (56.60%), Postives = 71/106 (66.98%), Query Frame = -2 Query: 212 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRD 529 MT KRRN G NKHGRGHV F+RC NC + PKDKAIKR+ +RN+VE AA+RD+ +A +Y Y +PKLY K+QYCVSCAIHS R PP R RD Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPRVRYNRD 106
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_SHEEP (40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 9.316e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_CRICR (40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 1.589e-29 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY ++ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_BRUPA (40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.075e-29 Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = -2 Query: 287 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHS 529 MT KRRN G NK GRGHV IRC+NCG+C PKDKAIK+F+VRNIV AAVRD+ DA YD+Y LPKLY K+ YCVSCAIHS Sbjct: 1 MTTKRRNHGRNKKGRGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYCVSCAIHS 81
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26A_SCHPO (40S ribosomal protein S26-A OS=Schizosaccharomyces pombe GN=rps26a PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.295e-28 Identity = 57/106 (53.77%), Postives = 70/106 (66.04%), Query Frame = -2 Query: 212 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRD 529 MT KRRN G NKHGRGH F+RC NC + PKDKAIKR+ +RN+VE AA+RD+ +A +Y Y +PK+Y K+QYCVSCAIH+ R PP R RD Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPRVRYNRD 106 The following BLAST results are available for this feature:
BLAST of DT214526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214526 ID=DT214526; Name=DT214526; organism=Citrus sinensis; type=EST; length=575bpback to top |