DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31 Identity = 65/135 (48.15%), Postives = 93/135 (68.89%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ EG VA+L +G ++ +A LS+ GI T+ADARF KPLD L+ +L ++H LITVEEG++GGFGSHV+H +A + + D+G+K+R +VLPD +I+ ASP A+AG+ I A L+ LG Sbjct: 497 EIGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=dxs PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 64/136 (47.06%), Postives = 89/136 (65.44%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG +ALL +G + C KA L+ LG+ T+ADARF KPLD++LV +L ++H L+T+EEGS+GGFGSHV +A G+LD V+ R +VLPD +++H +PT A AGL I LG+ Sbjct: 496 EIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 69/136 (50.74%), Postives = 84/136 (61.76%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+K R + LPD Y +H P A AGL I T + L R Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 69/136 (50.74%), Postives = 84/136 (61.76%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+K R + LPD Y +H P A AGL I T + L R Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAAEELGATGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 69/136 (50.74%), Postives = 84/136 (61.76%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+K R + LPD Y +H P A AGL I T + L R Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HYPNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=dxs PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30 Identity = 68/136 (50.00%), Postives = 88/136 (64.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG+V EG +A+L YG +Q LKA +L+ G+ TVADARF KPLD +L+ L + H L+T+EEGS GGFGS V +A G LD+G+K R + LPD + +H +P AGLT HIAA A+ LGR Sbjct: 493 EIGKGRVVREGTSIAILSYGTRLQEALKAAEMLAAQGLSATVADARFAKPLDNELIERLAREHEVLVTIEEGSRGGFGSFVLEHLANCGGLDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 65/132 (49.24%), Postives = 88/132 (66.67%), Query Frame = -2 Query: 197 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 592 EIGKG+V EG +VA+L +GA + LKA +L G+ TVADARFC+PLD L+ L + H LIT+E+G++GGFG+ V H++A G L+ G R + LPD YI+H SP + A AGLT + I TAL+ Sbjct: 496 EIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTALA 627
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 68/136 (50.00%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGF SHV F+A DGLLD G+K R + LPD Y +H P A AGL I + LGR Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGLKVRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALGR 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 69/136 (50.74%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G K R + LPD Y +H P A AGL I T + L R Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 69/136 (50.74%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G K R + LPD Y +H P A AGL I T + L R Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |