DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dxs PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V +GK VA+L +G MV A +L + +D TVA+ RF KP+D +LVREL Q H +L+TVEEG +GG GS ++ +++ G RP++ LPD +++H P + LA+ GL G IA Sbjct: 489 LGKGEVRRRTSQPDGKRVAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGS-----ACVEAMMEGGAV-RPVLQLGLPDRFVDHGDPAKLLAMCGLDGDGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ACAM1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=dxs PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IGK + G DV LL YG MV + +L++ G+ TV +ARF KPLD +L+ L Q ++T+EEG L GGFGS V L+ L+D V P+ +PD +EHA+P Q A GLT +A L LL Sbjct: 495 IGKAETLRHGDDVLLLAYGTMVNLASQVADMLTEHGVRATVVNARFAKPLDTELIIPLAQKIGQVVTLEEGCLPGGFGSAV-----LEALMDHQV-MAPVTRIGVPDQLVEHATPDQSKAELGLTPAQVAERVLGLL 625
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYMTH (1-deoxy-D-xylulose-5-phosphate synthase OS=Symbiobacterium thermophilum GN=dxs PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17 Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = -2 Query: 170 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 589 IG+G+V EG DVAL+G G M + C +A LL++ I V + RF KPLD +L+ + ++TVEE L GGFGS V A G+ + + +PD +++H P + L GLT +A A +LL R R L Sbjct: 486 IGRGEVMQEGADVALIGLGTMARVCQEAARLLAEKSISAMVINPRFVKPLDAELLLRAGREVGAVVTVEEACLAGGFGSAVLELYAAHGV---NARVERMGIPDEFVDHGQPARYLERYGLTPEGVAQRAEALLLRMRSDL 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NOSP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxs PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17 Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = -2 Query: 200 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 592 EIGK ++ G DV ++ YG MV ++A +LS+ GI+ TV +ARF KPLD +L+ L + +IT+EEG +GGFGS ++ + L+D+ V + +PD ++HA P + GLT H IA L Sbjct: 495 EIGKSEILRTGDDVLIVAYGTMVYPGMQAAEILSEHGIEATVINARFVKPLDTELILPLAKKIGRVITLEEGCIMGGFGSAIA-----EALMDADILVPVKRFGVPDVLVDHAEPNESKTELGLTSHQIAERVL 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DESAP (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulforudis audaxviator (strain MP104C) GN=dxs PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17 Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = -2 Query: 197 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 589 IG+ +V EG D+ L+ G MV +KA +L++ GI+ +V +ARF KPLD K + + LIT+EE + GGFGS V + GL D V+ + I LPD +IEH +P A GLT + TA S Sbjct: 489 IGRAEVLREGDDITLIAIGNMVPTAVKAAEILAERGIEASVVNARFVKPLDEKCICHYARRTGRLITLEENVIAGGFGSAVQELLVAKGLTD--VRVQLIGLPDVFIEHGAPHLLRAKYGLTVDRVVRTAES 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CHRVO (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromobacterium violaceum GN=dxs PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17 Identity = 54/121 (44.63%), Postives = 68/121 (56.20%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 IGKG V GK VA+L +G+MV L A L D TVAD RF KPLD +L+R+L Q H ++TVEE +GG GS + GL V + LPD+Y+EH P L+L GL Sbjct: 489 IGKGVVRRRGKQVAILAFGSMVHPALAAAEAL-----DATVADMRFVKPLDAELIRKLAQTHELIVTVEENVVMGGAGSGCGEALQAMGL---AVPTLHLGLPDDYVEHGDPALLLSLCGL 601
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BREBN (1-deoxy-D-xylulose-5-phosphate synthase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dxs PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16 Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IGK ++ EGK VA+L +G + + A L + GI + +ARFCKPLD +L+ L + +ITVEEGS +GGFGS V + G G+ + + +PD ++EH S +Q GLT HIAA SL+ Sbjct: 488 IGKAEIVREGKHVAILSFGHVFEIAEAAVNQLQEEGIKPMLVNARFCKPLDEELLFRLAKEGYDIITVEEGSEMGGFGSAVIECYSRAGY--HGMNVQIVAVPDYFVEHGSVKEQRQEVGLTADHIAARVRSLM 619
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas entomophila (strain L48) GN=dxs PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16 Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V +G VALL +G + L+ ID TV D RF KPLD LV E+ H L+T+EE + +GG G+ V F+A +G++ +P++ LPD Y+EHA P Q LA GL I A+ + + + Sbjct: 500 EIGKGVVRRQGGKVALLVFGVQLTEALQVAEQ-----IDATVVDMRFVKPLDEALVLEMAAGHELLVTIEENAIMGGAGAAVGEFLAREGVV------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAK 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEPK (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain KT2440) GN=dxs PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V +G+ VALL +G + A A+ I+ TV D RF KPLD LV EL +H L+T+EE + +GG G+ V F+A +L +P++ LPD Y+EHA P Q LA GL I A+ + + R Sbjct: 500 EIGKGVVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAR 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURS3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia sp. (strain 383) GN=dxs PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +L+TVEEG +GG GS ++ L++SGV RP++ LPD +I+H P + L+ GL G IA Sbjct: 489 LGKGEVRRQTSQPEGKRVAILAFGTMV-----APSLAAAEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVLQLGLPDLFIDHGDPAKLLSQCGLDGAGIA 612 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |