DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNPW (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain WH7803) GN=dxs PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16 Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = -2 Query: 179 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVL----PDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 589 IG+G+V +G D+ ++ YGAM L LL+ G+ TV +ARF +PLD +L+ L + ++T+EEG+L GGFGS ++ + LLD+ +K P +L PD ++HA+P Q GLT +A + L R++ Sbjct: 495 IGRGEVLRDGDDLLIVAYGAMNSKALATADLLASCGVQSTVVNARFLRPLDDELLHPLARRIGKVVTIEEGTLAGGFGSALT-----ESLLDADIK--PSILRLGIPDVLVDHATPQQSFEKLGLTPAQMAESIQGFLQRSK 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEMY (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=dxs PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16 Identity = 54/125 (43.20%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 230 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 592 EIGK V +GK ALL +G + A AL ++ TV D RF KPLD L+REL +H L+T+EE + +GG GS VS F+A ++ +P++ LPD Y+EHA P Q LA GL Sbjct: 500 EIGKAIVRRQGKGAALLVFGVQL-----AEALQVGEALNATVVDMRFVKPLDEALLRELAGSHELLVTIEENAVMGGAGSAVSEFLAAQNII------KPLLHLGLPDYYVEHAKPAQMLAECGL 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROM4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=dxs PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16 Identity = 52/145 (35.86%), Postives = 82/145 (56.55%), Query Frame = -2 Query: 164 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG-RTREALLL 592 +IG+G++ +G D+ +L YG+MV ++ LL + GI TV +ARF +PLD L+ L + ++T+EEG+L GGFGS V + LL V + +PD ++HASP Q GLT ++ + + G T ++L L Sbjct: 494 KIGRGEILEDGDDLLILAYGSMVTPAVQTAELLKQAGISSTVVNARFLRPLDQALIHPLARRIGKVVTIEEGALGGGFGSAVVESFSDQDLL---VPTFRLGIPDKLVDHASPQQSKESLGLTPSQMSKSIMKRYGWDTSDSLFL 635
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_THEEB (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxs PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16 Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = -2 Query: 164 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 592 EIGKG++ G+D+ L+ YG+MV ++ +L + G+ V +ARF KPLD +L+ L + ++T+EEG L GGFGS V + +L V + +PD +EHASP + A GLT +A T + G + A ++ Sbjct: 495 EIGKGELLRSGEDLLLVAYGSMVYPAMQVAEILKEHGMSAAVINARFAKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVLEALQEADIL---VPVLRLGVPDILVEHASPDESKADLGLTPPQMAETIMQKFGVPQRATVV 635
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURP6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia pseudomallei (strain 668) GN=dxs PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16 Identity = 53/135 (39.26%), Postives = 82/135 (60.74%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V +GK +A+L +G MV A +L + +D TVA+ RF KP+D +LV+ L + H +L+TVEEG +GG GS ++ +++SGV RP++ LPD +++H P + L+L GL G IA Sbjct: 489 LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMMESGVV-RPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURCJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dxs PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +++TVEEG +GG GS ++ L++SGV RP++ LPD +I+H P + L+ GL G IA Sbjct: 489 LGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAAEELDATVANMRFVKPVDAALVRELAETHDYVVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVLQLGLPDLFIDHGDPAKLLSQCGLDGAGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16 Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 IGKG G+ +A+L +G +V AL +D+TVAD RF +PLD L+REL H L+TVEE ++ GG GS VS ++A GL V R + LPD +++H +P + LA GL Sbjct: 495 IGKGVCRRRGRRIAVLAFGTLV-----VPALAVAEALDLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAGL---DVPVRHLGLPDRFVDHGTPAELLAEVGL 607
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain GB-1) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V +G+ +ALL +G + A A+ I+ TV D RF KPLD LV EL +H L+T+EE + +GG G+ V F+A +L +P++ LPD Y+EHA P Q LA GL I A+ + + + Sbjct: 500 EIGKGVVRRQGEKIALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAK 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = -2 Query: 206 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 592 EIGKG V +G+ VALL +G + A A+ I+ TV D RF KPLD LV EL +H L+T+EE + +GG G+ V F+A +L +P++ LPD Y+EHA P Q LA GL I A+ Sbjct: 500 EIGKGVVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEAS 621
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia cenocepacia (strain HI2424) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +L+TVEEG +GG GS ++ L++SGV RP++ LPD +++H + LA GL G IA Sbjct: 501 LGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAAEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVLQLGLPDQFVDHGDHAKLLAQCGLDGAGIA 624 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |