DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURCC (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia cenocepacia (strain MC0-3) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +L+TVEEG +GG GS ++ L++SGV RP++ LPD +++H + LA GL G IA Sbjct: 489 LGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAAEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVLQLGLPDQFVDHGDHAKLLAQCGLDGAGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia cenocepacia (strain AU 1054) GN=dxs PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +L+TVEEG +GG GS ++ L++SGV RP++ LPD +++H + LA GL G IA Sbjct: 489 LGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAAEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVLQLGLPDQFVDHGDHAKLLAQCGLDGAGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16 Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = -2 Query: 182 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDS--GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 589 IG+G++ EG D+ ++ YG+MV L LL + G+ TV +ARF +PLD L+ L + ++T+EEG+L GGFG+ V L+ L D V I +PD ++HA+P Q GLT +A L T Sbjct: 495 IGRGELLREGDDLMIVAYGSMVAPALATATLLEEAGLSTTVINARFLRPLDQALIHPLARRIPRVVTMEEGALPGGFGAAV-----LESLTDQDINVSMLRIGIPDKLVDHATPQQSKEALGLTPAQMAERILERFSNT 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEPW (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain W619) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16 Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG + +G+ VALL +G + A AL I+ TV D RF KPLD LV EL +H L+T+EE + +GG G+ V F+A ++ +P++ LPD Y+EHA P Q LA GL I A+ + + + Sbjct: 500 EIGKGVIRRQGEKVALLVFGVQL-----AEALQVAEQINATVVDMRFVKPLDEALVLELAGSHALLVTLEENAIMGGAGAAVGEFLASQAVI------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAK 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNS3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain CC9311) GN=dxs PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = -2 Query: 212 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 589 IG G+V EG DV ++ YGAMV + L+ +G++V V +AR+ +PLD L+ + + ++T+EEG+L GGFGS V + GL + I +PD ++HA+P Q GLT +A Sbjct: 495 IGCGEVVREGNDVLIVAYGAMVPKAMATAKCLAAVGVEVAVINARYLRPLDEALIHPMAKQIGKIVTMEEGALAGGFGSAVLESLQEKGL---AIPMLRIGIPDRLVDHATPQQSFEALGLTPDQMA 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNP6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxs PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = -2 Query: 188 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 589 IGK + +G D+ +L YG+MV L+ LL++ GI TV +ARF KPLD +L+ L + ++T EEG L GGFGS + + D V PI +PD +EHASP + GLT +A L G Sbjct: 495 IGKAEQLRQGDDLLMLAYGSMVYPALQTAELLNEHGISATVINARFAKPLDEELIVPLARQIGKVVTFEEGCLPGGFGSAIMESLQAH---DLQVPVLPIGVPDLLVEHASPDESKQELGLTPRQMADRILEKFG 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dxs PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 212 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 589 IGKG++ G D+ L+GYGAMV + L+ +LS+ GI TV +ARF KPLD +L+ L + + T EEG L GGFGS V + +L V + + D ++HA+P + A GLT +A Sbjct: 496 IGKGEILRNGDDILLIGYGAMVHSTLQVAEILSEHGISATVINARFVKPLDSELIAPLAKQIGKVATFEEGCLMGGFGSAVCEALQDHDVL---VPVKRFGIGDVLVDHATPAESKAAHGLTPAQMA 619
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNE7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus elongatus (strain PCC 7942) GN=dxs PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = -2 Query: 188 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 589 IGK + +G D+ +L YG+MV L+ LL++ GI TV +ARF KPLD +L+ L + ++T EEG L GGFGS + + D V PI +PD +EHASP + GLT +A L G Sbjct: 495 IGKAEQLRQGDDLLMLAYGSMVYPALQTAELLNEHGISATVINARFAKPLDEELIVPLARQIGKVVTFEEGCLPGGFGSAIMESLQAH---DLQVPVLPIGVPDLLVEHASPDESKQELGLTPRQMADRILEKFG 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia pseudomallei GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V +GK +A+L +G MV A +L + +D TVA+ RF KP+D +LV+ L + H +L+TVEEG +GG GS ++ +++SG RP++ LPD +++H P + L+L GL G IA Sbjct: 489 LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMMESGAV-RPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia pseudomallei (strain 1710b) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V +GK +A+L +G MV A +L + +D TVA+ RF KP+D +LV+ L + H +L+TVEEG +GG GS ++ +++SG RP++ LPD +++H P + L+L GL G IA Sbjct: 489 LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMMESGAV-RPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIA 612 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |