DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURP0 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia pseudomallei (strain 1106a) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V +GK +A+L +G MV A +L + +D TVA+ RF KP+D +LV+ L + H +L+TVEEG +GG GS ++ +++SG RP++ LPD +++H P + L+L GL G IA Sbjct: 489 LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMMESGAV-RPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURMA (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia mallei GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V +GK +A+L +G MV A +L + +D TVA+ RF KP+D +LV+ L + H +L+TVEEG +GG GS ++ +++SG RP++ LPD +++H P + L+L GL G IA Sbjct: 489 LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMMESGAV-RPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IGK V EG D A+L +G M+ KA A L + G ++ + +A KPLD KL+ L + L+T+EE L GGFGS V F G+ V+ + + +PD ++EH S ++ GLT IA T +S+L + R+ Sbjct: 491 IGKWNVLQEGTDAAILTFGTMIPVAEKALAQLKQAGYNIRLINANSVKPLDEKLLEALAEEELPLLTIEESVLQGGFGSAVLEFYNEKGM---HVELKRMGIPDYFVEHGSVSELYQEVGLTPERIADTLISMLPQKRK 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CHLTE (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlorobium tepidum GN=dxs PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15 Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = -2 Query: 200 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 589 +G+G++ +GK VALLG G M L+ ALL G+D V D RF KPLD +++ T ++T+EE S +GGFGS+V +++ G+K LPD ++ H S + GL ++ L Sbjct: 501 VGRGRILRDGKSVALLGIGTMSNRALETAALLEAAGLDPLVCDMRFLKPLDTEIIDMAASRCTHIVTIEENSIIGGFGSNVVNYL---HHAHPGIKCISFGLPDAFVTHGSMDELYREVGLDAESLSGKIL 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ANADE (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=dxs PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15 Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = -2 Query: 188 EIGKGKVF--VEGK-DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ V GK DV ++ G ++ L A L+ G+ VTV D RF KPLD L+ ++TVEEG L GGFG+ GLL++G+ R + +PD +I HA +Q A G+ IAA +L+G Sbjct: 490 EIGKGRLVRNVPGKPDVCVVAAGTTLKAALAAAEALAAEGVAVTVVDPRFVKPLDEALICAEAARAKRVVTVEEGCLAGGFGTACLEAFERHGLLEAGLGVRRLGIPDEFITHAEQAKQRAWVGIDAEAIAAACRALVG 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RALEJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia eutropha (strain JMP134) GN=dxs PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = -2 Query: 230 GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV--LPDNYIEHASPTQQLALAGL 562 G+ VA LG+G+MV L A L D +VAD RF KPLD++LV+ L + H +L+TVEEGS +GG GS V L+ L ++G+ +V LPD +I+H P L+ GL Sbjct: 508 GQRVAFLGFGSMVHPALGAAQAL-----DASVADMRFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAV-----LEALAEAGIDIPVLVLGLPDRFIDHGDPALLLSQCGL 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_GEOKA (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus kaustophilus GN=dxs PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IG +V +G D A+L +G + LKA L+K GI V V +ARF KP+D+ ++ EL ++ ++TVEE L GGFGS V F G G + +PD +IEH S ++ L GLT HI +++ R ++ Sbjct: 490 IGTWEVLRDGCDAAILTFGTTISMALKAADELAKDGISVKVVNARFLKPMDVAMLHELLESRLPILTVEEAVLQGGFGSAVLEFAHDHGY--HGAVIERMGIPDRFIEHGSVSELLNEIGLTSTHIIDRIKTMVPRKQK 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROM1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain NATL1A) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = -2 Query: 212 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 592 EIGK + EG+++ ++GYG+MV +K A+L + G++ TV +ARF +PLD + E + ++T+EEG+ LGGFGS V + D V I +PD ++HA+P Q GLT +A Sbjct: 494 EIGKAETIEEGENLLIIGYGSMVFPAIKTAAILKEFGVNCTVINARFIRPLDEDTIHEAAKRIGKVVTMEEGTLLGGFGSAVVESFNDN---DIFVPTLRIGIPDKLVDHATPQQSKESLGLTPEMMA 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_LYSSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IG +V EGKD ++L +G + ++A +L++ GID+ V +ARF KP+D ++ + NH ++T+EE L GGFGS V F G L++ V + +PD YIEH + Q L +T A LL + ++ Sbjct: 492 IGSWEVLREGKDASILTFGTTIPMAMQAADMLAQQGIDIEVVNARFIKPMDKDMLHRILSNHKPILTIEEAVLKGGFGSGVLEFAHDHGYLNAIVD--RMGIPDQYIEHGNVDQLLEEIHMTAEDAVARMQVLLQQKQQ 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 589 IG+G+V EG D+ ++ YG MV + LL + GI TV +ARF +PLD L+ L + ++T+EEG+L GGFG+ V ++ +L V I +PD ++HASP Q GLT Sbjct: 495 IGRGEVLCEGDDLLIVAYGVMVPAAMITAQLLQEAGIKATVINARFLRPLDQALIHPLARRIGSVVTMEEGALAGGFGAAVVESLSDQDVL---VPTFRIGIPDQLVDHASPQQSREALGLT 613 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |