DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROMA (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = -2 Query: 227 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 592 +IG+G++ EG D+ ++ YG+MV K L + GI TV +ARF +PLD L+ L + ++T+EEG+ LGGFGS + A D V I +PD + HASP Q GLT Sbjct: 494 KIGRGEILSEGSDLLIIAYGSMVAPAQKTALCLKESGISATVINARFLRPLDQGLIHPLARRIGKVVTMEEGTLLGGFGSAIVESFADQ---DIAVSTYRIGIPDKLVHHASPQQSKEELGLT 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_GEOSL (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Geobacter sulfurreducens GN=dxs1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IG G++ EG DVA++ G V L+A L++ GI TV +ARF KPLD +++ + + +IT EE +L GGFGS V +A +G+ +GV+ + + +PD ++E Q A G+ IAA + L Sbjct: 492 IGTGEILAEGDDVAIIAIGITVLPALEAARTLAEKGIRATVINARFVKPLDREMILQAARRTGCIITAEENALQGGFGSAVLELLADEGM--TGVRVKRLGIPDRFVEQGPQPQLRADLGIDAAGIAAATEAFL 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROMP (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxs PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15 Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = -2 Query: 212 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 592 +IG+G++ EG DV ++ YG+MVQ+ + LL GI + +ARF +PLD L+ L + ++T+EEG+L GGFGS + + + D + I +PD ++HASP Q GLT +A Sbjct: 494 KIGEGEILEEGDDVLIIAYGSMVQSATETANLLKNRGISACIINARFVRPLDQDLIIPLVRKLKKVVTMEEGTLVGGFGSAIVEMLNDN---DINIPVLRIGIPDVLVDHASPDQSKEKLGLTPDQMA 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURXL (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia xenovorans (strain LB400) GN=dxs PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = -2 Query: 230 IGKGKVFVE-----GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 589 +GKG++ E GK +A+L +G MV L A L D TVA+ RF KPLD LVR+L + H ++TVEEG +GG GS ++ LL SGV RP++ LPD +I+H P + LA GL Sbjct: 489 LGKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQL-----DATVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGS-----ACVEALLASGVT-RPVLQLGLPDRFIDHGDPAKLLAACGL 606
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ANASK (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter sp. (strain K) GN=dxs PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15 Identity = 53/139 (38.13%), Postives = 76/139 (54.68%), Query Frame = -2 Query: 188 EIGKGKVF--VEGK-DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ V GK DV ++ G ++ L A L+ G+ TV D RF KPLD +L+ ++TVEEG L GGFG+ GLL++G+ R + +PD +I HA +Q A G+ IAA +L+G Sbjct: 490 EIGKGRLVRNVPGKPDVCVVAAGTTLKAALAAAEALAAEGVAATVVDPRFVKPLDEELICAEAARAKRVVTVEEGCLAGGFGTACLEAFERRGLLEAGLGVRRLGIPDEFITHAEQAKQRAWVGIDADAIAAACRALVG 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNAS (1-deoxy-D-xylulose-5-phosphate synthase OS=Syntrophus aciditrophicus (strain SB) GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15 Identity = 50/146 (34.25%), Postives = 80/146 (54.79%), Query Frame = -2 Query: 158 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 592 E+GKG+V EG +A+L G V L A L + GI TV +ARF KPLD +L+ + ++ ++TVEE L GGFGS + F+ + + G++ + + + D + E A+ +Q L G+ IAA S++ R + + C Sbjct: 506 ELGKGEVLCEGGSLAILAVGDPVHPALTAAVQLREEGIYATVVNARFVKPLDRELLLRIVRSFKKILTVEENVLTGGFGSAILEFLEENDI--HGIQVKRLGIRDEFAEQATQAEQRRLYGIDEQGIAAAVRSMMNMGRSSQMEAC 649
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROM3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 589 IG+G+V EG D+ ++ YG MV + LL + G+ TV +ARF +PLD L+ L + ++T+EEG+L GGFG+ V ++ +L V I +PD ++HASP Q GLT Sbjct: 495 IGRGEVLCEGDDLLIVAYGVMVPAAMITAQLLQEAGVKATVINARFLRPLDQALIHPLARRIGRVVTMEEGALAGGFGAAVVESLSDQDVL---VPTFRIGIPDQLVDHASPQQSREALGLT 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NATTJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = -2 Query: 191 KGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 583 KG+ EG VA++G G MV + L+ +L K GI+ TV +ARF KPLD + E+ Q H ++ T EE + LGGFGS V ++ GL + LPD YI H ++ L+ L + L+ L Sbjct: 494 KGETIREGSQVAMIGVGKMVPDMLEVADMLKKEGIEPTVFNARFVKPLDESSILEIAQKHEYIYTFEENTELGGFGSQVLECLSKHGLAHKLID--RFCLPDEYIPHGDRSKVLSQYSLHSQELINKILNRL 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DECAR (1-deoxy-D-xylulose-5-phosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15 Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 +GKG + GKD+ALL +G++V A A+ + +D TVA+ RF KPLD L+ EL NH+ L+++EE + +GG GS + +A GL V + LPD +I+H Q LA GL Sbjct: 490 VGKGDIRRRGKDIALLAFGSLV-----AAAVAAGEELDATVANMRFIKPLDADLIVELAGNHSLLVSIEENAVIGGAGSEIERVLAERGL---QVPVLRLGLPDRFIDHGEQGQLLAELGL 602
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_THIDA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dxs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14 Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 230 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 592 EIGKG G+DVALL +G++V A AL + +D TVAD RF KPLD+ LV EL H L+T+EE ++ GG G+ V+ +A G++ V + L D +IEH LA GL Sbjct: 487 EIGKGVCRRRGRDVALLAFGSLV-----APALTAAERLDATVADMRFVKPLDVDLVGELAAGHRLLVTLEENAVAGGAGAAVAELLAQLGIV---VPVLQLGLSDVFIEHGDAAAMLAACGL 600 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |