DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NITMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 +G+G++ EG ++ALL +G+M+Q CL+A L+ TVA+ RF KPLD LV L NH L+TVEE + +GG GS V ++ G V + LPD +++ P+Q L+ GL Sbjct: 487 LGRGEIRREGAEIALLAFGSMLQPCLEAAEELN-----ATVANMRFVKPLDDDLVASLAANHELLVTVEENTVMGGAGSAVLESLSARG---RTVPVLQLGLPDTFLDQGDPSQMLSECGL 599
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NITEU (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosomonas europaea GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 +GKG++ +GK +ALL +G+M+ CL+A L D TV + RF KPLD +LV L H L+T+EE + +GG GS V ++ LD V+ + LPD++I+ P L+ GL Sbjct: 487 LGKGEIRRQGKQIALLAFGSMLTPCLEAGDEL-----DATVVNMRFVKPLDQELVATLAAEHELLVTIEENTIMGGAGSAVMESLS---SLDKNVRLLQLGLPDSFIDQGDPAHMLSDCGL 599
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHEPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14 Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 589 IGKG + +GK +A+L +G ++ + L A L D TVAD RF KPLD++LV++L ++H L+TVEE + +GG GS + LL + +P++ LPD +I+H +P + ++ GL Sbjct: 495 IGKGLIKRQGKKIAILNFGTLLASSLTAAEAL-----DATVADMRFVKPLDVELVKQLAESHDMLVTVEENAIMGGAGSGILE------LLQTLKLPKPVLLIGLPDEFIKHGAPDEIISELGL 607
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_GEOTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14 Identity = 46/139 (33.09%), Postives = 78/139 (56.12%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IG +V +G D +L +G + L+A L++ G+ V V +ARF KP+D ++ EL ++ ++T+EE L GGFGS V F G + ++ + +PD +IEH S ++ L GLT H+A +++ R ++ Sbjct: 492 IGTWEVLRDGSDAVILTFGTTISMALEAAEQLARDGVSVKVVNARFLKPMDEAMLHELLESRLPILTIEEAVLQGGFGSSVLEFAHDHGYHQAVIE--RMGIPDRFIEHGSVSELLDEIGLTAAHVADRIKTIMPRKQK 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CLOPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14 Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = -2 Query: 215 GKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 586 GKG++ +++AL+ G+MV+ + R L KLG+ T+ +ARF PLD +++ +L ++HT +T+EE GGFG VS F+ G+K I +P+ ++EH T GL I Sbjct: 491 GKGELIASEEEIALIAIGSMVETAVLVREHLHKLGLKATLVNARFISPLDEEMLHQLTKSHTLFVTMEENVKRGGFGEEVSVFLCEHDY--QGIKHLNISIPNMFVEHGDRTLLKEKLGLDAESI 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BORPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella parapertussis GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14 Identity = 55/124 (44.35%), Postives = 72/124 (58.06%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 589 +GKG V EG+ +A+LG+G +VQ L A ID TVAD RF KPLD +LV EL H L+TVEE + +GG GS V L+ L ++GV P++ LPD +I+H LA GL Sbjct: 490 LGKGLVRREGRRIAILGFGTLVQAALGAAGQ-----IDATVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAV-----LETLAEAGVT-LPVLQLGLPDAFIDHGDQAALLAGLGL 602
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BORBR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella bronchiseptica GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14 Identity = 55/124 (44.35%), Postives = 72/124 (58.06%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 589 +GKG V EG+ +A+LG+G +VQ L A ID TVAD RF KPLD +LV EL H L+TVEE + +GG GS V L+ L ++GV P++ LPD +I+H LA GL Sbjct: 490 LGKGLVRREGRRIAILGFGTLVQAALGAAGQ-----IDATVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAV-----LETLAEAGVT-LPVLQLGLPDAFIDHGDQAALLAGLGL 602
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_THERP (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxs PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14 Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IG+ ++ EG DVA++ GA V +A +L++ GI TV +ARF KPLD L+ + + L+TVEE L GGFGS V +A GLL ++ + L D + +HAS AG+ IA+ L+ L Sbjct: 485 IGRAELLREGSDVAIVALGATVLPAERAADILAERGIRATVINARFVKPLDRSLILDAARECGCLVTVEEAQLAGGFGSAVLETLADAGLLIPVLR---LGLADRFFDHASQASLRRQAGIDAESIASRTLAFL 615
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_POLSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=dxs PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14 Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 188 GKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 586 GKG++ EG VA+L +G ++ L+A KLG VTV + R+ KPLD +L+ ++ +H L+T+EEG+ +GG GS V + GL G + L D +IEH P + LAL GL I A ++ G Sbjct: 490 GKGEIRREGSGVAILAFGTLLYPALQAA---EKLG--VTVVNMRWAKPLDTELLLKVAASHEALVTLEEGAIMGGAGSAVGEALQAAGL---GKPLLQLGLKDEFIEHGDPAKLLALQGLDAAGIEAAVMARFG 615
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PARUW (1-deoxy-D-xylulose-5-phosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=dxs PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 215 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 592 E+GKG+V +EG ++ ++ G M Q LK R LL++ GI+ TV D F KPLD +L +L NH ++T+EE S + G GS +++F+ G + ++ + +P+ +++H L GL I Sbjct: 491 ELGKGEVLIEGTEILIVALGHMNQAALKVRDLLAQTGIEATVLDPIFVKPLDSELFCKLLLNHNKIVTIEEHSVVSGMGSIINNFLVGQGF--NQIQVLNLGIPEAFLDHGRNQDLLNEIGLVPEKI 615 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |