DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_THISH (1-deoxy-D-xylulose-5-phosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dxs PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 50/134 (37.31%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 +GK ++ +G+ VALL +GA++ L A L D TV + RF KPLD LVRE+ + H L+T+E+ + GG GS V+ +A+ G+ V + LPD + EH S + L+ AGL I A + L Sbjct: 493 VGKAQLRRKGRGVALLAFGAVLPAALAAAEPL-----DATVVNMRFVKPLDEALVREMAEGHDLLVTLEDNVVAGGAGSAVAESLAVQGIT---VPLLHLGLPDRFQEHGSREELLSEAGLDAEGILAAVRARL 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_MOOTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 50/137 (36.50%), Postives = 69/137 (50.36%), Query Frame = -2 Query: 182 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 589 IGKG+V G+DV +L G + L+A L+ GI+ TV + RF KPLD L+ L+TVEE L GGFGS V +A +G G++ R + + D ++ P GLT I A +LL T Sbjct: 490 IGKGEVLRRGRDVTILALGPLAYAALEAAGDLAARGIEATVINPRFIKPLDEDLILTWADRTGHLVTVEEHVLAGGFGSAVLELLARNG--RKGIRVRCLGVKDEFVHQGKPAILREHLGLTPAGIRAAVQALLAET 624
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHEON (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella oneidensis GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 48/117 (41.03%), Postives = 66/117 (56.41%), Query Frame = -2 Query: 251 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQ 589 IGKG + GK +ALL +G + A AL + +D TV D RF KPLD+ LV+E+ Q H L+TVEE + +GG GS V LL +P++ LPD +I+H SP + Sbjct: 495 IGKGVIKRLGKRIALLNFGTTL-----AAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLE------LLQQLKMPKPVLQIGLPDEFIKHGSPDE 600
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHELP (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = -2 Query: 209 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 592 EIGKG + EGK +A+L +G + + +A L D T+AD RF KPLD++LV++L +H L+TVEE + +GG GS V + L L + I LPD +I+H + LA L G I A Sbjct: 494 EIGKGLIKREGKKIAILNFGTTLASASQAAEAL-----DATLADMRFVKPLDVELVKQLATSHDLLVTVEENAIMGGAGSGV---LELLQQLKLPMPVLNIGLPDEFIKHGECGEILAELQLDGPGIEA 614
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CELJU (1-deoxy-D-xylulose-5-phosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 IGKG V EGK VALL +G ++ A + KLG ++ D RF KPLD +L+ + +H+ L+T+EE +L GG GS VS ++ G+ + + D +I+H S QQLA GL Sbjct: 499 IGKGVVRREGKQVALLCFGTLLPT---AAQVAEKLG--ASLCDMRFVKPLDSELIARMAASHSLLVTLEENALAGGAGSAVSEYLNSQGI---AIPLLQLGFADEFIDHNSQKQQLAQQGL 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BORA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella avium (strain 197N) GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 +GKG V G +A++G+G +V L A L D TVAD RF KPLD++L+REL H L+T+E+ + +GG GS V+ + + GL + + LPD +I+H LA GL Sbjct: 490 LGKGVVRRRGARIAIMGFGTLVPAALAAAEKL-----DATVADMRFVKPLDVELLRELAATHEALVTLEDAAVMGGAGSAVTEALNMAGLT---LPVLQLGLPDVFIDHGDQAALLAGVGL 602
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13 Identity = 50/128 (39.06%), Postives = 68/128 (53.12%), Query Frame = -2 Query: 209 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 589 IGKG++ EG D ALL G+ V +A L+ GID+ V +ARF KPLD L+ L + LI VEE + GGFG+ V + +G+ +GVK + PD Y+E + A GL I A Sbjct: 492 IGKGEILREGLDGALLAIGSTVYPAREAAEALAAEGIDLAVVNARFVKPLDRDLILSLARTTGRLIIVEENVIQGGFGTAVLELLEEEGI--NGVKVLRLGYPDRYVEQGEQHELRAQYGLDAPGITA 617
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHESA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain ANA-3) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = -2 Query: 251 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQ 589 IGKG + GK +A+L +G + A AL + +D TV D RF KPLD+ LV+E+ Q H L+TVEE + +GG GS V LL +P++ LPD +I+H SP + Sbjct: 495 IGKGVIKRLGKGIAMLNFGTTL-----AAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLE------LLQKLKMPKPVLQIGLPDEFIKHGSPEE 600
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROM9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxs PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 212 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 589 IG+ ++ EG D+ ++ YG+MV + ++ +L + I+ + +ARF KPLD L+ L ++T+EEG+L GGFGS + + L + + I +PD ++HASP Q GL +A Sbjct: 495 IGEAEILEEGNDILIIAYGSMVASAIETAEILKGMNINTCIVNARFVKPLDKNLIIPLASRIQKVVTMEEGTLIGGFGSAI---VELFNDNEVNIPVYRIGIPDVLVDHASPDQSKEKLGLMPDQMA 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PROM5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 43/132 (32.58%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 197 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 589 IG+G++ +G+D+ ++ YG+MV + ++ LL I V +ARF +PLD L+ L ++T+EEG+L GGFGS + + L D + I +PD ++HASP Q GL + ++ ++ Sbjct: 495 IGEGEILEDGEDILIVAYGSMVSSAIETSKLLKDKNISPCVINARFVRPLDKDLILPLANKIKKVVTMEEGTLIGGFGSAI---VELLNDNDINIPVFRIGIPDVLVDHASPDQSKTQLGLMPNQMSENIIN 623 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |