DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_METPP (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylibium petroleiphilum (strain PM1) GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = -2 Query: 176 GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 562 G+ +A+L +G ++ L A L D TVA+ RF KPLD +LV L ++H L+TVEEG L GG GS V L+ L +GV P++ LPD ++EH P + LA GL I + L G E Sbjct: 502 GRRIAILAFGTLLYPALAAAEKL-----DATVANMRFIKPLDTELVLSLARSHEALVTVEEGCLQGGAGSAV-----LEALQAAGVN-LPVLTLGLPDEFVEHGDPAKLLAQLGLDAAGIEQSILKRFGAKLE 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus subtilis GN=dxs PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = -2 Query: 212 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPI---VLPDNYIEHASPTQQLALAGLTGHHIA 589 IG +V G D +L +G ++ ++A L K G+ V V +ARF KP+D K+++ + + ++T+EE L GGFGS + F D G PI +PD +IEH S T L GLT +A Sbjct: 492 IGTWEVLRPGNDAVILTFGTTIEMAIEAAEELQKEGLSVRVVNARFIKPIDEKMMKSILKEGLPILTIEEAVLEGGFGSSILEFAH-----DQGEYHTPIDRMGIPDRFIEHGSVTALLEEIGLTKQQVA 616
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHESW (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain W3-18-1) GN=dxs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -2 Query: 251 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQ 589 IGKG + GK +ALL +G + A AL + +D TV D RF KPLD +LV E+ Q H L+TVEE + +GG GS V LL +P++ LPD +I+H SP + Sbjct: 495 IGKGVIKRVGKRIALLNFGTTL-----ASALTAADNLDATVVDMRFVKPLDAELVTEMAQTHDILVTVEENAIMGGAGSGVLE------LLQKLKMPKPVLQIGLPDEFIKHGSPEE 600
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHEPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dxs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = -2 Query: 251 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQ 589 IGKG + GK +ALL +G + A AL + +D TV D RF KPLD +LV E+ Q H L+TVEE + +GG GS V LL +P++ LPD +I+H SP + Sbjct: 495 IGKGVIKRVGKRIALLNFGTTL-----ASALTAADNLDATVVDMRFVKPLDAELVTEMAQTHDILVTVEENAIMGGAGSGVLE------LLQKLKMPKPVLQIGLPDEFIKHGSPEE 600
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PHOPR (1-deoxy-D-xylulose-5-phosphate synthase OS=Photobacterium profundum GN=dxs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 248 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQ 592 EIGKG + +G+ +A+L +G M++ L+A L+ TVAD RF KPLD +L+ EL NH L+TVEE ++ GG GS V F+ L + I LPD ++E TQQ Sbjct: 493 EIGKGIIRRQGEKIAILNFGTMLEYALEAAEKLN-----ATVADMRFVKPLDEELILELAANHDVLVTVEENAIAGGAGSGVIEFMMKSKCLKPVLN---IGLPDRFVEQG--TQQ 598
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PELCD (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dxs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = -2 Query: 179 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 589 IGKG+ +G D + G + + L A +L+ G+ V V D RF KPLD +L+ + ++TVEE GGFGS V +A +GL V+ I LPD +IE + Q A GL IAA+ + + R Sbjct: 491 IGKGEKLRDGSDAVIFALGVVCKEALVASDILAGEGLSVAVVDPRFLKPLDQQLLIAEARRTGVVVTVEENVRQGGFGSAVLEMLADEGL---AVRVLRIGLPDRFIEQGTQQQLYARYGLDAEGIAASVRNFMHHDR 625
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DESPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfotalea psychrophila GN=dxs PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = -2 Query: 191 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 592 EIG+G++ EG D+ LL G V ++A L+K GI +V + RF KPLD +L+ + + +IT+E+ +L GFGS V ++ L G+K + + P ++EH +G+T I AL LL Sbjct: 502 EIGRGELLREGDDILLLPIGNRVYPAMRAAEELAKQGISASVINPRFIKPLDAELICQQAKKTGRIITIEDNTLCSGFGSAVLELLSQKSLY--GIKTKILGHPHAFVEHGPQKTLWENSGITSRGIIMAALDLL 634
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_LEPCP (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 54/136 (39.71%), Postives = 72/136 (52.94%), Query Frame = -2 Query: 209 GKGKV------FVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAA 586 G+G+V V G +A+L +G ++ L A L D TVA+ RF KPLD LV +L + H L+TVEEG L GG GS V L+ L +G++ P++ LPD +IEH P LA GL I A Sbjct: 495 GRGEVRRQAGGHVRGPRIAILAFGTLLYPALAAAEKL-----DATVANMRFIKPLDAALVEQLARTHDALVTVEEGCLMGGAGSAV-----LEALQAAGLQ-TPVLTLGLPDQFIEHGDPALLLAACGLDSAGIEA 619
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus pumilus (strain SAFR-032) GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IG +V GKD +L +G ++ L+A L K G V V +ARF KPLD ++ ++ ++T+EE L GGFGS V +I S +K + +PD +IEH S L GLT +A T +L Sbjct: 492 IGSWEVLHPGKDAVILTFGTTIKMALQAAEELQKEGKSVRVVNARFIKPLDEAMLNDILSEGIPILTIEEAVLQGGFGSSVLEYI--HDKKASHIKVERMGIPDEFIEHGSVDALLEEIGLTKVQVADTLRDML 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ACTPJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = -2 Query: 230 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 592 E+GKGK+ +G+ VA+L +G ++ +AR + K + T+AD RF KPLD +LV EL +H L+T+EE ++ GG GS V+ ++ G K RP+V +PD ++ A+ + A GL Sbjct: 489 EVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIRPLVMLGIPDFFVPQATQAESYADLGL 602 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |