DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ACTP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = -2 Query: 230 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 592 E+GKGK+ +G+ VA+L +G ++ +AR + K + T+AD RF KPLD +LV EL +H L+T+EE ++ GG GS V+ ++ G K RP+V +PD ++ A+ + A GL Sbjct: 489 EVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIRPLVMLGIPDFFVPQATQAESYADLGL 602
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ACTP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=dxs PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = -2 Query: 230 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 592 E+GKGK+ +G+ VA+L +G ++ +AR + K + T+AD RF KPLD +LV EL +H L+T+EE ++ GG GS V+ ++ G K RP+V +PD ++ A+ + A GL Sbjct: 489 EVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIRPLVMLGIPDFFVPQATQAESYADLGL 602
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_STRCO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces coelicolor GN=dxs2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = -2 Query: 185 DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 556 DV L+ GA+ CL+ LL+K GI TV D R+ KP+D + + L + H ++TVE+ S +GG GS V+ L D+G V R +P +++HAS + LA GLT IA L+ R Sbjct: 502 DVLLVSVGALAPMCLEVADLLNKQGISTTVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGSAVA-----QALRDAGVDVPLRDFGIPPRFLDHASRAEVLAEIGLTAPDIARQVTGLVAR 622
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBVY (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=dxs PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = -2 Query: 260 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHAS 592 EIGKG++ +G+ VA+L +G + N L+A L+ TVAD RF KPLD L+R+L H LIT+EE ++ GG G+ V F+ + ++ +P++ LPD +I + Sbjct: 493 EIGKGRLVRQGEKVAILSFGTFLANALEAAEALN-----ATVADMRFVKPLDEALIRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIM------KPVLNLGLPDKFIHQGT 596
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio parahaemolyticus GN=dxs PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG+V +G+ VA+L +G + N L+A ++ TVAD RF KPLD L+R+L H L+T+EE ++ GG G+ V F+ + ++ +P++ LPD +I + + GL I + L + Sbjct: 493 EIGKGRVVRKGEKVAILSFGTFLPNALEAAK-----NLNATVADMRFVKPLDEALIRQLADEHDVLVTLEENAIAGGAGAGVIEFMMKEKII------KPVLNLGLPDKFIHQGTQEELHEELGLDAKGIEKSIAEYLAK 621
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_WIGBR (1-deoxy-D-xylulose-5-phosphate synthase OS=Wigglesworthia glossinidia brevipalpis GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 +GKG V +GK +A+L +G ++ ++A + +L D T+ D RF KPLD L+ + + H LIT+EE +GG GS V+ FI + LL V I +PDN++ H S T+ + GL Sbjct: 497 LGKGIVLRKGKKIAILNFGVLL---IQANIVAKEL--DATLVDMRFVKPLDNLLLIRMAKTHKALITIEENVIMGGAGSAVNEFIMYNKLL---VPVLNIGIPDNFVSHGSQTEVRSSLGL 609
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBCM (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 224 EIGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTG 592 EIGKG++ EG+ VA+L +G ++ N L+A L+ TVAD RF KPLD L+++L Q H L+T+EE ++ GG G+ V F+ + L +P++ LPD +I + + A GL G Sbjct: 493 EIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLN-----ATVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQL------KPVLNLGLPDQFIVQGTQEEMHAELGLDG 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio cholerae GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 224 EIGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTG 592 EIGKG++ EG+ VA+L +G ++ N L+A L+ TVAD RF KPLD L+++L Q H L+T+EE ++ GG G+ V F+ + L +P++ LPD +I + + A GL G Sbjct: 493 EIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLN-----ATVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQL------KPVLNLGLPDQFIVQGTQEEMHAELGLDG 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBC3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 224 EIGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTG 592 EIGKG++ EG+ VA+L +G ++ N L+A L+ TVAD RF KPLD L+++L Q H L+T+EE ++ GG G+ V F+ + L +P++ LPD +I + + A GL G Sbjct: 493 EIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLN-----ATVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQL------KPVLNLGLPDQFIVQGTQEEMHAELGLDG 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHEWM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dxs PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = -2 Query: 242 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLA 589 IGKG + +G+ VA+L +G ++ + L A L D TVAD RF KPLD++L++EL +H L+TVEE + +GG GS V + L L + + LPD +I+H + +A Sbjct: 495 IGKGLIKRQGQKVAILNFGTLLASVLTAGESL-----DATVADMRFVKPLDVELIKELANSHDVLVTVEENAIMGGAGSGV---LELLQQLKQPMPVLQLGLPDEFIKHGDSGEIIA 603 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |