DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DESDG (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio desulfuricans (strain G20) GN=dxs PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLK-ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 E G+G++ +G DVA++ G+ V L A + G V+V +ARF KPLD + + L ++H L+ +EE + GGF S V +A L +GV R + LPD+++ H + Q L G+ I T L +LG Sbjct: 500 EHGRGELLKKGADVAVIAVGSRVHPALAVAEEIERSTGKAVSVFNARFVKPLDAEQLVALARSHDSLLLLEENTTTGGFSSGVLELLADHDCL-AGVHVRRLGLPDDFVTHGTQKQLRKLTGIDRAAIRRTLLEMLG 635
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACWK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 589 IG + EG A+L +G + ++A L + G+ V V +ARF KP+D + EL + ++T+EE L GGFG+ V F + +G + ++ + +PD +IEH S T+ L GLT Sbjct: 492 IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEQAGVSVKVVNARFIKPMDEAYLHELLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSALIE--RMGIPDRFIEHGSVTKLLEEIGLT 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 589 IG + EG A++ +G + ++A L K G+ V V +ARF KP+D + +L + ++T+EE L GGFGS V F A G + ++ + +PD +IEH S T+ L GLT Sbjct: 492 IGTWETLREGTQAAIVTFGTTIPMAMEAAERLGKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGSGVMEFAAEHGYHSALIE--RMGIPDYFIEHGSVTKLLEEIGLT 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces avermitilis GN=dxs2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11 Identity = 45/130 (34.62%), Postives = 69/130 (53.08%), Query Frame = -2 Query: 185 EGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 565 + DV L+ GA+ CL+ LL K GI TV D R+ KP+D + + L + H ++TVE+ S +GG GS ++ L D+G V R +P +++HAS + +A GLT IA L+ + Sbjct: 499 DAPDVLLVSVGALAPMCLEIAGLLDKQGISATVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGSAIA-----QALRDAGVDVPLRDFGIPPRFLDHASRGEVMAEIGLTAPDIARQVTGLVSK 622
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBF1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dxs PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 248 EIGKG------KVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQ 592 EIGKG KV +G+ VA+L +G + N L+A L D TVAD RF KPLD L+ EL NH L+T+EE ++ GG GS V F+ + L+ ++ + LPD +I A TQ+ Sbjct: 493 EIGKGRLLRETKVTEKGERVAILNFGTFLANSLEAAEKL-----DATVADMRFAKPLDEALICELVTNHDVLVTIEENAISGGAGSGVIEFLMKNRLVKPVLQ---LGLPDEFI--AQGTQE 604
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_POLNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=dxs PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = -2 Query: 188 GKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 586 GKG++ EG +A+L +G ++ L+A KLG TV + R+ KPLD +L+ ++ H L+T+EEG+ +GG GS V + G++ ++ + L D +IEH LAL GL I A S G Sbjct: 494 GKGEIRREGSGIAILAFGTLLYPALQAA---EKLG--ATVVNMRWAKPLDTELLLKVAAGHEVLVTLEEGAIMGGAGSAVGEALQAAGVVKPLLQ---LGLKDEFIEHGEVAVLLALQGLDAAGIEAAVRSRFG 619
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VIBFM (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio fischeri (strain MJ11) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 49/122 (40.16%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 248 EIGKGKVFVE------GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQ 592 EIGKG++ E G+ VA+L +G + N L+A L D TVAD RF KPLD L+ EL NH L+T+EE ++ GG GS V F+ + L+ ++ + LPD +I A TQ+ Sbjct: 493 EIGKGRLLRETKVTDKGERVAILNFGTFLANSLEAAEKL-----DATVADMRFAKPLDEALICELVTNHDVLVTIEENAISGGAGSGVIEFLMKNRLVKPVLQ---LGLPDEFI--AQGTQE 604
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PHOLL (1-deoxy-D-xylulose-5-phosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 IGKG + +G VA+L +G ++ + + A L D TV D RF KPLD +L+ ++ NH L+T+EE + +GG GS V+ + G L V+ I LPD ++ S + A GL Sbjct: 494 IGKGVIRRQGNKVAILNFGTLLPDAITAAESL-----DATVVDMRFVKPLDKELILDMADNHDLLVTLEENAIMGGAGSGVNELLMQKGRL---VQILNIGLPDQFVPQGSQEEIKADLGL 606
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HAES2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus somnus (strain 2336) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = -2 Query: 242 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLA 589 +GK K+ +GK++A+L +G ++ K +D TV D RF KPLD + ++E+ Q H+ ++T+EE ++ GG GS V+ + V + LPDN+I + + LA Sbjct: 489 LGKSKLIRQGKNIAILNFGTLLSEATKVAE-----DLDATVVDMRFVKPLDTQRIQEIAQTHSLIVTLEENAIQGGAGSAVAETLYQQ---QQKVSLLQLGLPDNFIPQGTQKEMLA 597
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HAES1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus somnus (strain 129Pt) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = -2 Query: 242 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLA 589 +GK K+ +GK++A+L +G ++ K +D TV D RF KPLD + ++E+ Q H+ ++T+EE ++ GG GS V+ + V + LPDN+I + + LA Sbjct: 489 LGKSKLIRQGKNIAILNFGTLLSEATKVAE-----DLDATVVDMRFVKPLDTQRIQEIAQTHSLIVTLEENAIQGGAGSAVAETLYQQ---QQKVSLLQLGLPDNFIPQGTQKEMLA 597 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |