DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HAEIN (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGK ++ +G+ +A+L +G ++ + L+ L KL + TV D RF KP+DI+++ L Q H +L+T+EE ++ GG GS V+ + G + LPD +I A+ + LA GL I L+ + + Sbjct: 494 IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSG---KSTALLQLGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HAEIE (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae (strain PittEE) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGK ++ +G+ +A+L +G ++ + L+ L KL + TV D RF KP+DI+++ L Q H +L+T+EE ++ GG GS V+ + G + LPD +I A+ + LA GL I L+ + + Sbjct: 494 IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSG---KSTALLQLGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_AERS4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Aeromonas salmonicida (strain A449) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 206 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 592 E+GKG++ GK A+L +G ++Q +ARA L D T+ D RF KP+D LV L +H +T+E+ + +GG GS A++ LL + +P++ LPD ++E + + AL GL I A+ Sbjct: 493 ELGKGRIVRNGKGTAILAFGTLLQ---QARAAAEAL--DATLVDMRFVKPMDEALVLSLAASHDQFVTIEDNAIMGGAGS------AVNELLMRNKQCKPVLNLGLPDRFVEQGTQEEIYALLGLDSTGIQAS 614
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_STRMK (1-deoxy-D-xylulose-5-phosphate synthase OS=Stenotrophomonas maltophilia (strain K279a) GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 50/134 (37.31%), Postives = 74/134 (55.22%), Query Frame = -2 Query: 200 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATAL 589 IGKG++ ++G +ALL +G+ V A + +LG+ +V + RF KPLD +LV + H L+T+E+ + GG GS V + +G+L RPI+ LPD+Y HAS LA AG+ I A L Sbjct: 496 IGKGELRLQGSRIALLAFGSTVA---AAEQVGRELGL--SVVNMRFIKPLDRELVLAVAAQHEGLVTIEDNVVAGGAGSGVGELLNAEGVL------RPILHLGLPDSYQHHASREDLLAEAGIDAAGIRAAVL 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HAEI8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae (strain 86-028NP) GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGK ++ +G+ +A+L +G ++ + L+ L KL + TV D RF KP+DI+++ L Q H +L+T+EE ++ GG GS V+ + G + LPD +I A+ + LA GL I L+ + + Sbjct: 494 IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSG---KSTALLQLGLPDYFIPQATRQEALADLGLDTKGIEEKILNFIAK 621
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SHEDO (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dxs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = -2 Query: 209 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 589 IGKG+V +GK +A+L +G + + L+ L D +VAD RF KPLD+ L+ L H ++T+EE + +GG GS V + + ++ I LPD +I+H +P + +A L I A Sbjct: 495 IGKGRVCRQGKKIAILNFGTTLASALEVAEQL-----DASVADMRFIKPLDVDLLHTLALEHDVIVTIEENAIMGGAGSGVIEALHKLKICKPVLQ---IGLPDEFIKHGAPDEIIAELRLDSKGILA 614
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CYTH3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dxs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = -2 Query: 188 FEEI--GKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 598 FEEI GKG+ +G DVA+L G + ++A+ALL + + D RF KP+D +++ + + +ITVE+G L GGFGS V F+A + ++ + +PD +EH + G IA T +L G Sbjct: 496 FEEITIGKGRKVSDGDDVAILSIGHIGNYVIEAKALLREEELSPAHFDMRFVKPIDEEMLHLVFKKFKKIITVEDGCLMGGFGSAVLEFMADNNYAAQVIR---LGIPDRIVEHGEQAELHKECGFDPQSIARTVRNLSG 632
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus halodurans GN=dxs PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IG +V EG D +L +G M+ +A LS+ G + + +AR KPLD ++ E+ ++ ++T+EE ++ G FGS V F G V + + +PD +IEH S ++ L GLT +A LL R ++ Sbjct: 491 IGSWEVLQEGTDACILTFGTMIPVAEQASKELSQQGYSIRLINARSVKPLDEAMLHEIAKSGRPVLTLEETAVQGSFGSAVLEFFHDHGY--HNVVTQRMGIPDRFIEHGSVSELLEEIGLTSSQVANQLSKLLPRKQK 627
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_VEREI (1-deoxy-D-xylulose-5-phosphate synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = -2 Query: 209 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAA 553 +A+L +G+++ L+A L D TV + R+ KPLD L+R++ + H L+T+EEG+ +GG GS V+ + G+L RP++ L D +IEH P + LA+ GL I A Sbjct: 511 IAILAFGSLLYPALEAADAL-----DATVVNMRWAKPLDDALLRQVAEGHDALVTLEEGAIMGGAGSAVTETLNAAGIL------RPVLQLGLADIFIEHGDPAKLLAMQGLNAAGIRA 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=dxs PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = -2 Query: 266 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEH 592 E G+ ++ EG+D+A++ G V LL+ G++ + DARF KPLD +++ Q + L+T+E+ SL GGFGS + + +G+ + I LPD ++EH Sbjct: 489 EPGQSRLIAEGQDLAIIAVGRGVSIARDVVDLLAGKGVNPLLVDARFVKPLDRRVIAGAAQKYHRLLTIEDNSLAGGFGSAIGEMLVEEGI---DAELLHIALPDEFVEH 595 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |